C5Z5E2 (C5Z5E2_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb10g005260 EMBL EER89309.1

Gene names

Name:	Sb10g005260 EMBL EER89309.1
ORF Names:	SORBIDRAFT_10g005260 EMBL EER89309.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare)

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	554 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, acting on glycosyl bonds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5Z5E2 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: 2E1F85F578053A7E	FASTA	554	59,364
	10 20 30 40 50 60 MAAAGTRQQL GRLLGGLWFL LAALSLRAAA GQPAVATVDA RRAVAATGED FVCATLDWWP 70 80 90 100 110 120 PDKCDYGTCA WGRAGLLNLD LSNKVLLNAV RAFSPPLVLR LGGSLQNKVV YGTADLGGRP 130 140 150 160 170 180 CAPFAKNASE MHGFTQGCLP LRRWDELNAF FQKSGAKIVF GLNALNGRVP LPDKSMGGPW 190 200 210 220 230 240 DYTNAAALIR YSVNKGYRIH GWELGNELSG TGVGTRVGAE QYATDVIALK KLVDDIYRSN 250 260 270 280 290 300 QTKPLVLAPG GFFDQAWFSQ LIAKTKPNLL NVITHHIYNL GPGKDTHLID KIFNPSILDG 310 320 330 340 350 360 MKGTFSSLQG MLKSAGTSTV AWVGEAGGAY NSGRHLVTDA FVFSFWFLDQ LGMSAKYDTK 370 380 390 400 410 420 SYCRQSLIGG NYGLLNTTTF QPNPDYYSAL LWHRLMGTKV LATTFNGTNK IRAYAHCARD 430 440 450 460 470 480 SPGITLLLIN LSGNTTTQVS VTVTTQGQGA VAAHKHGARK HVGGRKFGHV HGPRFTGVDE 490 500 510 520 530 540 AAAGAVRDEY HLTPKDGNLR SQVMLLNGKA LATDAAGNIP ALEAVKVDAA QPIAVAPYSI 550 VFARISHFNA PACS

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed: 19189423] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000769 Genomic DNA. Translation: EER89309.1.
RefSeq	XP_002437942.1. XM_002437897.1.
3D structure databases
ProteinModelPortal	C5Z5E2.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb10g005260.1; Sb10g005260.1; Sb10g005260.
GeneID	8065389.
KEGG	sbi:SORBI_10g005260.
Phylogenomic databases
GeneTree	EPGT00050000011306.
OMA	RIHGWEL.
PhylomeDB	C5Z5E2.
ProtClustDB	CLSN2690256.
Family and domain databases
InterPro	IPR005199. Glyco_hydro_79. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHER	PTHR14363. Glyco_hydro_79_N. 1 hit.
Pfam	PF03662. Glyco_hydro_79n. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C5Z5E2_SORBI

Accession

Primary (citable) accession number: C5Z5E2

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	December 14, 2011
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)