C5Z3D1 (C5Z3D1_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
3-phosphoshikimate 1-carboxyvinyltransferase RuleBase RU000531
EC=2.5.1.19 RuleBase RU000531

Gene names

Name:	Sb10g002230 EMBL EER87791.1
ORF Names:	SORBIDRAFT_10g002230 EMBL EER87791.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare)

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	506 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Phosphoenolpyruvate + 3-phosphoshikimate = phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate. RuleBase RU000531
Pathway	Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 6/7. RuleBase RU004116
Sequence similarities	Belongs to the EPSP synthase family. RuleBase RU004164

Ontologies

Keywords
Biological process	Amino-acid biosynthesis Aromatic amino acid biosynthesis RuleBase RU000531
Molecular function	Transferase RuleBase RU000531
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	aromatic amino acid family biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	3-phosphoshikimate 1-carboxyvinyltransferase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5Z3D1 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: 77CC671B1B0504A5	FASTA	506	53,450
	10 20 30 40 50 60 MAAMATKATV SLDLAAGPRH HHRPSSAARP SARPAASAAV RGLRARGLRV VPLAAAAAPA 70 80 90 100 110 120 VQAGAEEIVL QPIKEISGTV KLPGSKSLSN RILLLAALSE GTTVVDNLLN SEDVHYMLGA 130 140 150 160 170 180 LNTLGLSVEA DKVAKRAVVV GCGGKFPVED AKEEVQLFLG NAGTAMRPLT AAVTAAGGNA 190 200 210 220 230 240 TYVLDGVPRM RERPIGDLVV GLKQLGADVD CFLGTDCPPV RINGIGGLPG GKVKLSGSIS 250 260 270 280 290 300 SQYLSALLMA APLALGDVEI EIIDKLISIP YVEMTLRLME RFGVKAEHSD SWDRFYIKGG 310 320 330 340 350 360 QKYKSPKNAY VEGDASSASY FLAGAAITGG TVTVEGCGTT SLQGDVKFAE VLEMMGAKVT 370 380 390 400 410 420 WTETSVTVTG PPRQPFGRKH LKAIDVNMNK MPDVAMTLAV VALFANGPTA IRDVASWRVK 430 440 450 460 470 480 ETERMVAIRT ELTKLGASVE EGPDYCIITP PEKLNVTAID TYDDHRMAMA FSLAACAEVP 490 500 VTIRDPGCTR KTFPDYFDVL STFVKN

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed: 19189423] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000769 Genomic DNA. Translation: EER87791.1.
RefSeq	XP_002436424.1. XM_002436379.1.
UniGene	Sbi.5880.
3D structure databases
ProteinModelPortal	C5Z3D1.
ModBase	Search...
Protein-protein interaction databases
STRING	C5Z3D1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb10g002230.1; Sb10g002230.1; Sb10g002230.
GeneID	8068394.
KEGG	sbi:SORBI_10g002230.
Phylogenomic databases
GeneTree	EPGT00050000009088.
OMA	GADIEWG.
PhylomeDB	C5Z3D1.
ProtClustDB	PLN02338.
Family and domain databases
HAMAP	MF_00210. EPSP_synth. [Tree]
InterPro	IPR001986. Enolpyruvate_Tfrase_dom. IPR006264. EPSP_synthase. IPR023193. EPSP_synthase_CS. IPR013792. RNA3'P_cycl/enolpyr_Trfase_a/b. [Graphical view]
Gene3D	G3DSA:3.65.10.10. EPSP_synthase. 2 hits.
KO	K00800.
Pfam	PF00275. EPSP_synthase. 1 hit. [Graphical view]
PIRSF	PIRSF000505. EPSPS. 1 hit.
SUPFAM	SSF55205. RNA3'_cycl/enolpyr_transf_A/B. 1 hit.
TIGRFAMs	TIGR01356. AroA. 1 hit.
PROSITE	PS00104. EPSP_SYNTHASE_1. 1 hit. PS00885. EPSP_SYNTHASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5Z3D1_SORBI

Accession

Primary (citable) accession number: C5Z3D1

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	December 14, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)