C5Z2U2 (C5Z2U2_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb10g001280 EMBL EER89084.1

Gene names

Name:	Sb10g001280 EMBL EER89084.1
ORF Names:	SORBIDRAFT_10g001280 EMBL EER89084.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare) [Reference proteome]

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › Liliopsida › commelinids › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	383 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5Z2U2 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: E1316F0114749A86	FASTA	383	42,535
	10 20 30 40 50 60 MASTALVAVA VGGGLCPGLV ASCSVASCSL RAGGGDSPRL GRRLVLLQRG GGAEGERKRI 70 80 90 100 110 120 RNCPIFRCAN EVDVVTEDDN VDGDATDDEE DLEAAADDAI DADVDTEDEL DSSLPEDVEW 130 140 150 160 170 180 IKQQPLPYPL DALEPYISKE TVGQHWGVHQ QIHVDRLNGM IGGSEWEGMS LGQMMLASFN 190 200 210 220 230 240 EGREQPHPPF FHAAQVWNHD FYWRSMKPGG GGKPPERLLK FINRDFGSYE GMIRQFMDAA 250 260 270 280 290 300 LTQFGSGWVW LSYKGSGLPY VKSRSPIASD NYGRLVISKT PNAINPLVWG HSHAYYLDYE 310 320 330 340 350 360 DRRADYVSAI LENLVSWEIV ESRLTKAVVR AVERDEDLRR RIQRKQHLSQ ANGQSRARPR 370 380 TRQGRPTGWQ GDQEVARSSP VEA

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000769 Genomic DNA. Translation: EER89084.1.
RefSeq	XP_002437717.1. XM_002437672.1.
UniGene	Sbi.14004.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb10g001280.1; Sb10g001280.1; Sb10g001280.
GeneID	8066912.
KEGG	sbi:SORBI_10g001280.
Organism-specific databases
Gramene	C5Z2U2.
Phylogenomic databases
eggNOG	COG0605.
HOGENOM	HOG000084169.
KO	K04564.
OMA	MIGGSEW.
ProtClustDB	CLSN2695897.
Family and domain databases
InterPro	IPR001189. Mn/Fe_SOD. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. [Graphical view]
PANTHER	PTHR11404. PTHR11404. 1 hit.
Pfam	PF02777. Sod_Fe_C. 1 hit. PF00081. Sod_Fe_N. 1 hit. [Graphical view]
PRINTS	PR01703. MNSODISMTASE.
SUPFAM	SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C5Z2U2_SORBI

Accession

Primary (citable) accession number: C5Z2U2

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	March 6, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)