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Protein
Submitted name:

Putative uncharacterized protein Sb10g001280

Gene

Sb10g001280

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein Sb10g001280Imported
Gene namesi
Name:Sb10g001280Imported
ORF Names:SORBIDRAFT_10g001280Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
ProteomesiUP000000768: Chromosome 10

Organism-specific databases

GrameneiC5Z2U2.

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb10g001280.1.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0605.
HOGENOMiHOG000084169.
InParanoidiC5Z2U2.
KOiK04564.
OMAiDYEDRRA.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.

Sequencei

Sequence statusi: Complete.

C5Z2U2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASTALVAVA VGGGLCPGLV ASCSVASCSL RAGGGDSPRL GRRLVLLQRG
60 70 80 90 100
GGAEGERKRI RNCPIFRCAN EVDVVTEDDN VDGDATDDEE DLEAAADDAI
110 120 130 140 150
DADVDTEDEL DSSLPEDVEW IKQQPLPYPL DALEPYISKE TVGQHWGVHQ
160 170 180 190 200
QIHVDRLNGM IGGSEWEGMS LGQMMLASFN EGREQPHPPF FHAAQVWNHD
210 220 230 240 250
FYWRSMKPGG GGKPPERLLK FINRDFGSYE GMIRQFMDAA LTQFGSGWVW
260 270 280 290 300
LSYKGSGLPY VKSRSPIASD NYGRLVISKT PNAINPLVWG HSHAYYLDYE
310 320 330 340 350
DRRADYVSAI LENLVSWEIV ESRLTKAVVR AVERDEDLRR RIQRKQHLSQ
360 370 380
ANGQSRARPR TRQGRPTGWQ GDQEVARSSP VEA
Length:383
Mass (Da):42,535
Last modified:September 1, 2009 - v1
Checksum:iE1316F0114749A86
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000769 Genomic DNA. Translation: EER89084.1.
RefSeqiXP_002437717.1. XM_002437672.1.
UniGeneiSbi.14004.

Genome annotation databases

EnsemblPlantsiSb10g001280.1; Sb10g001280.1; Sb10g001280.
GeneIDi8066912.
KEGGisbi:SORBI_10g001280.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000769 Genomic DNA. Translation: EER89084.1.
RefSeqiXP_002437717.1. XM_002437672.1.
UniGeneiSbi.14004.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4558.Sb10g001280.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiSb10g001280.1; Sb10g001280.1; Sb10g001280.
GeneIDi8066912.
KEGGisbi:SORBI_10g001280.

Organism-specific databases

GrameneiC5Z2U2.

Phylogenomic databases

eggNOGiCOG0605.
HOGENOMiHOG000084169.
InParanoidiC5Z2U2.
KOiK04564.
OMAiDYEDRRA.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. BTx623Imported.

Entry informationi

Entry nameiC5Z2U2_SORBI
AccessioniPrimary (citable) accession number: C5Z2U2
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: January 7, 2015
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.