C5Z079 (C5Z079_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb09g024010 EMBL EES19725.1

Gene names

Name:	Sb09g024010 EMBL EES19725.1
ORF Names:	SORBIDRAFT_09g024010 EMBL EES19725.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare) [Reference proteome]

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › Liliopsida › commelinids › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	674 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone]. RuleBase RU004542 SAAS SAAS007728 S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N(6)-methyl-L-lysine.
Subcellular location	Nucleus By similarity RuleBase RU004542.
Sequence similarities	Contains 1 SET domain. RuleBase RU004538 Contains 1 post-SET domain. RuleBase RU004541 Contains 1 pre-SET domain. RuleBase RU004542 Contains SET domain. SAAS SAAS007728 Contains pre-SET domain. SAAS SAAS007728

Ontologies

Keywords
Cellular component	Chromosome SAAS SAAS007728 Nucleus RuleBase RU004542 SAAS SAAS007728
Ligand	S-adenosyl-L-methionine SAAS SAAS007728
Molecular function	Methyltransferase RuleBase RU004541 SAAS SAAS007728 Transferase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	chromosome Inferred from electronic annotation. Source: UniProtKB-KW nucleus Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	histone-lysine N-methyltransferase activity Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5Z079 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: BB1141EF197AC249	FASTA	674	74,184
	10 20 30 40 50 60 MYRASNFVPD PNQVLLDAKP LRSLAPMFPA PMGVNVNQSS TPPLVCVTPV GQFPAGFGAG 70 80 90 100 110 120 NLPAFGSFTT FSATANGVSY TGTSANGAID ATPISAYKTR TGISLGDDEL YSGNQTLVTK 130 140 150 160 170 180 RKRGRPLGSG RNGPNGKVKR PKPTYKNFVA GKELAFLSSS SDPREIVESV HMAFEALRRR 190 200 210 220 230 240 HLQMDETQDA SRRADLKAGA IMMASNIRAN TGKRVGTVPG VEIGDIFYFR MELCVLGLHA 250 260 270 280 290 300 PSMGGIDYMT TKFGNDEESV AICIVSAGGY ENEDDDTDVL VYSGQGGNSR NTEERHDQKL 310 320 330 340 350 360 ERGNLALERS LHRKNVIRVV RGFKDPFCLT GKIYIYDGLY KIHESWKEKT RSGINCFKYK 370 380 390 400 410 420 LLREPGQRDG AALWKMTQRW IDNPATRGRV LLADLSSKAE ALPVCVVNDV DHEKGPGEFT 430 440 450 460 470 480 YTNQVKYSRP LSSMKKLQGC GCQSVCLPGD ASCACGQHNG GDLPYSSLGL LSCRKPIIYE 490 500 510 520 530 540 CGESCNCSIN CRNKVTQKGS RLHFEVFRTT NRGWGLRCWE PVRAGSFICE YAGEVIDELR 550 560 570 580 590 600 VNLNDCEDDY IFQTVCPGEK TLKWNCGPEM IGEESTYVSS DEFEPLPIKI SAKNMGNVSR 610 620 630 640 650 660 FMNHSCSPNV FWQPVQYDHG DDGHPHIMFF ALKHIPPMTE LTYDYGVAGA ESSGPGSRRT 670 KNCMCGSQNC RGLF

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000768 Genomic DNA. Translation: EES19725.1.
RefSeq	XP_002441295.1. XM_002441250.1.
UniGene	Sbi.8347.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb09g024010.1; Sb09g024010.1; Sb09g024010.
GeneID	8064166.
KEGG	sbi:SORBI_09g024010.
Organism-specific databases
Gramene	C5Z079.
Phylogenomic databases
eggNOG	COG3440.
HOGENOM	HOG000238382.
KO	K11420.
OMA	SGINCFK.
ProtClustDB	CLSN2691959.
Family and domain databases
Gene3D	2.30.280.10. 1 hit.
InterPro	IPR025794. Hist-Lys_N-MeTrfase_plant. IPR003616. Post-SET_dom. IPR007728. Pre-SET_dom. IPR015947. PUA-like_domain. IPR001214. SET_dom. IPR003105. SRA_YDG. [Graphical view]
Pfam	PF05033. Pre-SET. 1 hit. PF02182. SAD_SRA. 1 hit. PF00856. SET. 1 hit. [Graphical view]
SMART	SM00317. SET. 1 hit. SM00466. SRA. 1 hit. [Graphical view]
SUPFAM	SSF88697. SSF88697. 1 hit.
PROSITE	PS50868. POST_SET. 1 hit. PS50867. PRE_SET. 1 hit. PS51575. SAM_MT43_SUVAR39_2. 1 hit. PS50280. SET. 1 hit. PS51015. YDG. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5Z079_SORBI

Accession

Primary (citable) accession number: C5Z079

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	November 13, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)