Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Putative uncharacterized protein Sb09g003820

Gene

Sb09g003820

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein Sb09g003820Imported
Gene namesi
Name:Sb09g003820Imported
ORF Names:SORBIDRAFT_09g003820Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
ProteomesiUP000000768 Componenti: Chromosome 9

Organism-specific databases

GrameneiC5Z041.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb09g003820.1.

Family & Domainsi

Sequence similaritiesi

Belongs to the cullin family.UniRule annotation

Phylogenomic databases

eggNOGiCOG5647.
HOGENOMiHOG000176712.
InParanoidiC5Z041.
KOiK03347.
OMAiWVYSQSR.

Family and domain databases

Gene3Di1.10.10.10. 2 hits.
InterProiIPR016157. Cullin_CS.
IPR016158. Cullin_homology.
IPR001373. Cullin_N.
IPR019559. Cullin_neddylation_domain.
IPR016159. Cullin_repeat-like_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00888. Cullin. 1 hit.
PF10557. Cullin_Nedd8. 1 hit.
[Graphical view]
SMARTiSM00182. CULLIN. 1 hit.
SM00884. Cullin_Nedd8. 1 hit.
[Graphical view]
SUPFAMiSSF74788. SSF74788. 1 hit.
SSF75632. SSF75632. 1 hit.
PROSITEiPS01256. CULLIN_1. 1 hit.
PS50069. CULLIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5Z041-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGQERRTID LEEGWAFMQK GITKLKNILE GKPEPQFSSE DYMMLYTTIY
60 70 80 90 100
NMCTQKPPHD YSQQLYDKYR ESFEEYITSM VLPSLREKHD EFMLRELVQR
110 120 130 140 150
WSNHKVMVRW LSRFFHYLDR YFISRRSLTP LKEVGLTCFR ELIYQEIKGQ
160 170 180 190 200
VKDAVIALID KEREGEQIDR ALLKNVLDIF VEIGLGQMEC YENDFEDFLL
210 220 230 240 250
KDTTEYYSVK AQSWILEDSC PDYMIKAEEC LKREKERVGH YLHISSEQKL
260 270 280 290 300
LEKVQNELLA QYATPLLEKE HSGCSALLRD DKVEDLSRMY RLFSKITRGL
310 320 330 340 350
EPISNMFKTH VTNEGTALVK QAEDSASNKK PEKKDMVGMQ EQVFVWKIIE
360 370 380 390 400
LHDKYVAYVT ECFQGHTLFH KALKEAFEVF CNKGVSGSSS AELLATFCDN
410 420 430 440 450
ILKKGCSEKL SDEAIEDALE KVVRLLAYIS DKDLFAEFYR KKLARRLLFD
460 470 480 490 500
KSANDEHERS ILTKLKQQCG GQFTSKMEGM VTDLTVARDH QTKFEEFVAG
510 520 530 540 550
HPELNPGIDL AVTVLTTGFW PSYKTFDINL PAEMVKCVEV FKEFYQTRTK
560 570 580 590 600
HRKLTWIYSL GTCNINAKFD AKPIELIVTT YQAALLLLFN GSDRLSYSEI
610 620 630 640 650
VTQLNLSDDD VVRLLHSLSC AKYKILTKEP ANRSISPNDV FEFNSKFTDR
660 670 680 690 700
MRRIKIPLPP VDEKKKVVED VDKDRRYAID ASIVRIMKSR KVMGHQQLVA
710 720 730 740
ECVEQLSRMF KPDFKAIKKR IEDLITRDYL ERDKDNANMY KYLA
Length:744
Mass (Da):86,831
Last modified:September 1, 2009 - v1
Checksum:i3CC378E58BE93330
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000768 Genomic DNA. Translation: EES19028.1.
RefSeqiXP_002440598.1. XM_002440553.1.
UniGeneiSbi.17936.

Genome annotation databases

EnsemblPlantsiSb09g003820.1; Sb09g003820.1; Sb09g003820.
GeneIDi8075980.
KEGGisbi:SORBI_09g003820.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000768 Genomic DNA. Translation: EES19028.1.
RefSeqiXP_002440598.1. XM_002440553.1.
UniGeneiSbi.17936.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4558.Sb09g003820.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiSb09g003820.1; Sb09g003820.1; Sb09g003820.
GeneIDi8075980.
KEGGisbi:SORBI_09g003820.

Organism-specific databases

GrameneiC5Z041.

Phylogenomic databases

eggNOGiCOG5647.
HOGENOMiHOG000176712.
InParanoidiC5Z041.
KOiK03347.
OMAiWVYSQSR.

Family and domain databases

Gene3Di1.10.10.10. 2 hits.
InterProiIPR016157. Cullin_CS.
IPR016158. Cullin_homology.
IPR001373. Cullin_N.
IPR019559. Cullin_neddylation_domain.
IPR016159. Cullin_repeat-like_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00888. Cullin. 1 hit.
PF10557. Cullin_Nedd8. 1 hit.
[Graphical view]
SMARTiSM00182. CULLIN. 1 hit.
SM00884. Cullin_Nedd8. 1 hit.
[Graphical view]
SUPFAMiSSF74788. SSF74788. 1 hit.
SSF75632. SSF75632. 1 hit.
PROSITEiPS01256. CULLIN_1. 1 hit.
PS50069. CULLIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. BTx623Imported.

Entry informationi

Entry nameiC5Z041_SORBI
AccessioniPrimary (citable) accession number: C5Z041
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: January 7, 2015
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.