C5YVI6 (C5YVI6_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb09g028380 EMBL EES19941.1

Gene names

Name:	Sb09g028380 EMBL EES19941.1
ORF Names:	SORBIDRAFT_09g028380 EMBL EES19941.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare)

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	296 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	lipopolysaccharide biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	3-deoxy-manno-octulosonate cytidylyltransferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5YVI6 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: C9D34C30783A95EE	FASTA	296	32,590
	10 20 30 40 50 60 MPICSPSSDS SSSSGSGSRA WVLHGLVLGA AAAAAAAAYL YRRPSGFRSR AVGIIPARFA 70 80 90 100 110 120 STRFEGKPLV HILGKPMIQR TWERVMLASS LDHVVVATDD ERIAECCRGF GADVIMTSES 130 140 150 160 170 180 CKNGSERCCE ALKKLEKRYD IVVNIQGDEP LIEPEIIDGV VMALQRAPDA VFSTAVTSLK 190 200 210 220 230 240 PEDAFDTNRV KCVVDNQGYA IYFSRGLIPF NKSGNVNPKY LYLLHLGISG FDSKFLKIYP 250 260 270 280 290 ELPPTPLQME EDLEQLKVLE NSYRMKVIKV DHDAHGVDAP EDVEKIEALM RARNIQ

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed: 19189423] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000768 Genomic DNA. Translation: EES19941.1.
RefSeq	XP_002441511.1. XM_002441466.1.
3D structure databases
ProteinModelPortal	C5YVI6.
ModBase	Search...
Protein-protein interaction databases
STRING	C5YVI6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb09g028380.1; Sb09g028380.1; Sb09g028380.
GeneID	8063591.
KEGG	sbi:SORBI_09g028380.
Phylogenomic databases
GeneTree	EPGT00050000019225.
OMA	INVQADE.
PhylomeDB	C5YVI6.
ProtClustDB	PLN02917.
Family and domain databases
HAMAP	MF_00057. CMP_KDO_synth. [Tree]
InterPro	IPR003329. Cytidylyl_trans. IPR004528. KdsB. [Graphical view]
KO	K00979.
PANTHER	PTHR21485:SF4. PTHR21485:SF4. 1 hit.
Pfam	PF02348. CTP_transf_3. 1 hit. [Graphical view]
TIGRFAMs	TIGR00466. KdsB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C5YVI6_SORBI

Accession

Primary (citable) accession number: C5YVI6

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)