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Protein
Submitted name:

Putative uncharacterized protein Sb09g007410

Gene

Sb09g007410

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

LigaseSAAS annotation

Keywords - Biological processi

Ubl conjugation pathwaySAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein Sb09g007410Imported
Gene namesi
Name:Sb09g007410Imported
ORF Names:SORBIDRAFT_09g007410Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
ProteomesiUP000000768 Componenti: Chromosome 9

Organism-specific databases

GrameneiC5YV51.

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb09g007410.1.

Structurei

3D structure databases

ProteinModelPortaliC5YV51.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ubiquitin-conjugating enzyme family.UniRule annotation

Phylogenomic databases

eggNOGiCOG5078.
HOGENOMiHOG000233455.
InParanoidiC5YV51.
KOiK10689.
OMAiWSPVWTL.

Family and domain databases

Gene3Di3.10.110.10. 1 hit.
InterProiIPR000608. UBQ-conjugat_E2.
IPR023313. UBQ-conjugating_AS.
IPR016135. UBQ-conjugating_enzyme/RWD.
[Graphical view]
PfamiPF00179. UQ_con. 1 hit.
[Graphical view]
SUPFAMiSSF54495. SSF54495. 1 hit.
PROSITEiPS00183. UBIQUITIN_CONJUGAT_1. 1 hit.
PS50127. UBIQUITIN_CONJUGAT_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5YV51-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQASRARLFK EYKEVQREKS ADPDIQLICD DSNIFKWTAL IKGPSETPYE
60 70 80 90 100
GGVFQLAFAI PEQYPLLPPQ VRFLTKIFHP NVHFKTGEIC LDILKNAWSP
110 120 130 140 150
AWTLQSVCRA IIALMAHPEP DSPLNCDSGN LLRSGDIRGF QSMAKMYTKL

AAMPKKS
Length:157
Mass (Da):17,727
Last modified:September 1, 2009 - v1
Checksum:iB9EA9DA0546F5968
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000768 Genomic DNA. Translation: EES17906.1.
RefSeqiXP_002439476.1. XM_002439431.1.
UniGeneiSbi.8494.

Genome annotation databases

EnsemblPlantsiSb09g007410.1; Sb09g007410.1; Sb09g007410.
GeneIDi8058271.
KEGGisbi:SORBI_09g007410.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000768 Genomic DNA. Translation: EES17906.1.
RefSeqiXP_002439476.1. XM_002439431.1.
UniGeneiSbi.8494.

3D structure databases

ProteinModelPortaliC5YV51.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4558.Sb09g007410.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiSb09g007410.1; Sb09g007410.1; Sb09g007410.
GeneIDi8058271.
KEGGisbi:SORBI_09g007410.

Organism-specific databases

GrameneiC5YV51.

Phylogenomic databases

eggNOGiCOG5078.
HOGENOMiHOG000233455.
InParanoidiC5YV51.
KOiK10689.
OMAiWSPVWTL.

Family and domain databases

Gene3Di3.10.110.10. 1 hit.
InterProiIPR000608. UBQ-conjugat_E2.
IPR023313. UBQ-conjugating_AS.
IPR016135. UBQ-conjugating_enzyme/RWD.
[Graphical view]
PfamiPF00179. UQ_con. 1 hit.
[Graphical view]
SUPFAMiSSF54495. SSF54495. 1 hit.
PROSITEiPS00183. UBIQUITIN_CONJUGAT_1. 1 hit.
PS50127. UBIQUITIN_CONJUGAT_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. BTx623Imported.

Entry informationi

Entry nameiC5YV51_SORBI
AccessioniPrimary (citable) accession number: C5YV51
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: March 4, 2015
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.