C5YV51 (C5YV51_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb09g007410 EMBL EES17906.1

Gene names

Name:	Sb09g007410 EMBL EES17906.1
ORF Names:	SORBIDRAFT_09g007410 EMBL EES17906.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare) [Reference proteome]

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › Liliopsida › commelinids › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	157 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ubiquitin-conjugating enzyme family. RuleBase RU004027

Ontologies

Keywords
Biological process	Ubl conjugation pathway SAAS SAAS023313
Molecular function	Ligase SAAS SAAS023313
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	fatty acid beta-oxidation Inferred from electronic annotation. Source: EnsemblPlants/Gramene protein import into peroxisome matrix Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Molecular_function	acid-amino acid ligase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5YV51 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: B9EA9DA0546F5968	FASTA	157	17,727
	10 20 30 40 50 60 MQASRARLFK EYKEVQREKS ADPDIQLICD DSNIFKWTAL IKGPSETPYE GGVFQLAFAI 70 80 90 100 110 120 PEQYPLLPPQ VRFLTKIFHP NVHFKTGEIC LDILKNAWSP AWTLQSVCRA IIALMAHPEP 130 140 150 DSPLNCDSGN LLRSGDIRGF QSMAKMYTKL AAMPKKS

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000768 Genomic DNA. Translation: EES17906.1.
RefSeq	XP_002439476.1. XM_002439431.1.
UniGene	Sbi.8494.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb09g007410.1; Sb09g007410.1; Sb09g007410.
GeneID	8058271.
KEGG	sbi:SORBI_09g007410.
Organism-specific databases
Gramene	C5YV51.
Phylogenomic databases
eggNOG	COG5078.
HOGENOM	HOG000233455.
KO	K10689.
OMA	PAWESIV.
ProtClustDB	CLSN2689869.
Family and domain databases
Gene3D	3.10.110.10. 1 hit.
InterPro	IPR000608. UBQ-conjugat_E2. IPR023313. UBQ-conjugating_AS. IPR016135. UBQ-conjugating_enzyme/RWD. [Graphical view]
Pfam	PF00179. UQ_con. 1 hit. [Graphical view]
SUPFAM	SSF54495. UBQ-conjugat/RWD-like. 1 hit.
PROSITE	PS00183. UBIQUITIN_CONJUGAT_1. 1 hit. PS50127. UBIQUITIN_CONJUGAT_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5YV51_SORBI

Accession

Primary (citable) accession number: C5YV51

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	May 1, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)