C5YUN6 (C5YUN6_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb09g006500 EMBL EES19212.1

Gene names

Name:	Sb09g006500 EMBL EES19212.1
ORF Names:	SORBIDRAFT_09g006500 EMBL EES19212.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare)

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	642 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Molecular function	calcium ion binding Inferred from electronic annotation. Source: InterPro mannosyl-oligosaccharide 1,2-alpha-mannosidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5YUN6 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: 82742EEEE34A290B	FASTA	642	71,700
	10 20 30 40 50 60 MSGTSGPLPY SMRDVGAGGA YNNAKFRHRS RLKIVLQSLA TNSSKYRCGK FTVGKFLSLL 70 80 90 100 110 120 MVSGLLYLFL HKGSEGIVSS ELHGKEVQNK NVRRAPNIRR FWRKPPRLPP RLPPNEIYKN 130 140 150 160 170 180 NSLLQQSPSE WTSRQKKVKE AFEHAWSGYQ KYAMGYDELM PLSHRGTDGL GGLGATIVDS 190 200 210 220 230 240 LDTAIIMGAD DVVSEASKWI EDNLMQRISE KGQVNLFETT IRVLGGLLSA YHLSGGHHPG 250 260 270 280 290 300 AGDSGVPVTY KKANPERLLE VSKDLADRLL LAFTSSPTAI PLSDVILRDH TAHAAPDGLS 310 320 330 340 350 360 STSEASTLQL EFSYLSKVSG DPKYDREAMK VLEHMHTLPK VEGLVPIYIN PSSGQFSGEN 370 380 390 400 410 420 IRLGSRGDSY YEYLLKVWVQ QEEYRDSSLK YLFEMYTEAM RGVKHLLVRK TVPNGLVFVG 430 440 450 460 470 480 ELPSGQNGGF SPKMDHLVCF LPGTLALGAT KGITKRKALE SNLLTDEDKE NLQLAEDLAK 490 500 510 520 530 540 TCVEMYFVTS TGLAPEIAYF HIEGDTEGGP DGGNKSSKYI NDIIIKPLDR HNLLRPETVE 550 560 570 580 590 600 SLFVLYRITE DPKYREWGWQ IFQAFEKYTK VDSGGYTSLD DVTSLPPSTR DKMETFFLGE 610 620 630 640 TLKYLYLLFD ENNTLPLDKY VFNTEAHPLP VMRSAERASH SV

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed: 19189423] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000768 Genomic DNA. Translation: EES19212.1.
RefSeq	XP_002440782.1. XM_002440737.1.
UniGene	Sbi.8303.
3D structure databases
ProteinModelPortal	C5YUN6.
ModBase	Search...
Protein-protein interaction databases
STRING	C5YUN6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb09g006500.1; Sb09g006500.1; Sb09g006500.
GeneID	8055739.
KEGG	sbi:SORBI_09g006500.
Phylogenomic databases
GeneTree	EPGT00070000030134.
OMA	AWGHDNL.
PhylomeDB	C5YUN6.
ProtClustDB	CLSN2917102.
Family and domain databases
InterPro	IPR001382. Glyco_hydro_47. [Graphical view]
Gene3D	G3DSA:1.50.10.50. Glyco_hydro_47. 1 hit.
KO	K01230.
PANTHER	PTHR11742. Glyco_hydro_47. 1 hit.
Pfam	PF01532. Glyco_hydro_47. 1 hit. [Graphical view]
PRINTS	PR00747. GLYHDRLASE47.
SUPFAM	SSF48225. Glyco_hydro_47. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C5YUN6_SORBI

Accession

Primary (citable) accession number: C5YUN6

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	December 14, 2011
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)