C5YUK2 (C5YUK2_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb09g026940 EMBL EES18583.1

Gene names

Name:	Sb09g026940 EMBL EES18583.1
ORF Names:	SORBIDRAFT_09g026940 EMBL EES18583.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare)

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	746 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular component	intrinsic to endoplasmic reticulum membrane Inferred from electronic annotation. Source: InterPro
Molecular function	transferase activity, transferring hexosyl groups Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5YUK2 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: DFEFA22CDF5E9617	FASTA	746	84,674
	10 20 30 40 50 60 MAGQAARRGG TMRPPSSGSG MRAAAARSPA ASFLLAAAAA ASLVGGFYFW LVVSSFRLPD 70 80 90 100 110 120 SGAAGCRPDG EGSWAVGMFY GSSPLALRPI ELEGRSNDNS SAWPVANPVL TCATPTEAGY 130 140 150 160 170 180 PSNFVADPFL YIEGDTLYLF FESKTTTSMQ GDIGVARSFN QGATWEFLGI ALDEAWHLSY 190 200 210 220 230 240 PFVFKYENEI YMMPEGNKKK ELRLYRATKF PLEWTLEKVL VNKPLIDASL VQFEGYWWLF 250 260 270 280 290 300 ASDFTRYGVE KNAELEIWYS NSPLGPWTEH KQNPIYKSDK SLGARNGGRL FVFEGSLYRP 310 320 330 340 350 360 GQDCSGTYGR RVKLYKVEKL SKEEYKEVPV NLGIEEPKKG RNAWNGMRYH HMDAQQLASG 370 380 390 400 410 420 GWIAVMDGDR VPSGDSTRRS LIGYIAFLLA SALVIFVGFM KGAISCYIPP SSWVPLTRRT 430 440 450 460 470 480 ELSRVFSVHR FNQKVRRYST NISRYISATK TKLSEKTWSN MLFFCVVALF GIVNVCIAVH 490 500 510 520 530 540 FLCGGNGAEE AYTYQGQHSQ FTMVTMTYEA RIWNLKVFIE HYSRCESVRE IVVVWNKGTP 550 560 570 580 590 600 PSSDAFDSTV PVRIRVEEIN SLNNRFRVDP LIKTRAVFEL DDDIMMTCTD LEKGFRVWRE 610 620 630 640 650 660 HPERMVGFYP RMIDGNPMQY RNERYARGKN GYNLILTGAA FMDSEFAFTT YWNEKAREGR 670 680 690 700 710 720 DYVHKNFNCE DLLMNFLYAN ASSTRTVEYV HPAWAIDTSK LSSVAISRNT QKHYDIRTDC 730 740 LAKFSSIYGP LPQKWEFGMR EDHWDK

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed: 19189423] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000768 Genomic DNA. Translation: EES18583.1.
RefSeq	XP_002440153.1. XM_002440108.1.
UniGene	Sbi.2422.
3D structure databases
ProteinModelPortal	C5YUK2.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb09g026940.1; Sb09g026940.1; Sb09g026940.
GeneID	8061073.
KEGG	sbi:SORBI_09g026940.
Phylogenomic databases
GeneTree	EPGT00070000029894.
OMA	WREHPER.
PhylomeDB	C5YUK2.
ProtClustDB	CLSN2690785.
Family and domain databases
InterPro	IPR023296. Glyco_hydro_43_beta-prop. IPR015338. HexNAc_Trfase_a. [Graphical view]
Gene3D	G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
Pfam	PF09258. Glyco_transf_64. 1 hit. [Graphical view]
SUPFAM	SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C5YUK2_SORBI

Accession

Primary (citable) accession number: C5YUK2

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	December 14, 2011
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)