C5YRW2 (C5YRW2_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb08g021190 EMBL EES16352.1

Gene names

Name:	Sb08g021190 EMBL EES16352.1
ORF Names:	SORBIDRAFT_08g021190 EMBL EES16352.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare)

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	364 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	protein N-linked glycosylation Inferred from electronic annotation. Source: InterPro
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Molecular function	beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5YRW2 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: 66496B593C7E9218	FASTA	364	42,183
	10 20 30 40 50 60 MARDLPHPPV ARRKILRFKF LIPFVLVLSV SVIAVTQYFQ SISYLLRPLW DTPPKPFTRI 70 80 90 100 110 120 PHYYAPNMSM AQLCQLHGWG ILPAPRRVFD AVLFSNELDI LEIRYRELLP YVDRFVLLEA 130 140 150 160 170 180 NSTFTGIPKS LSFFENFSRF GFAGSKIVYD MLSIGDLDTG SHRQPFHVEA YHRRSLNMLI 190 200 210 220 230 240 RRSGIAVGDI LIMADADEIP TPETVQLLKW CDGIPPVMHL EMKNYMYSFE FPVDDNSWRA 250 260 270 280 290 300 TAHMYNERTS YRHSRQSNLI LADAGWHCSF CFREIKEFVF KMKAYSHADR VKQKSFLNPD 310 320 330 340 350 360 RIQKIICNGD DLFDMLPEEY TFTDLFKKMG PIPKSASAVH LPSHLIKNAD KFKFLLPGGC LRSE

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed: 19189423] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000767 Genomic DNA. Translation: EES16352.1.
RefSeq	XP_002442514.1. XM_002442469.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb08g021190.1; Sb08g021190.1; Sb08g021190.
GeneID	8084386.
KEGG	sbi:SORBI_08g021190.
Phylogenomic databases
GeneTree	EPGT00050000017473.
OMA	KFVILES.
PhylomeDB	C5YRW2.
ProtClustDB	CLSN2682029.
Family and domain databases
InterPro	IPR006813. Glyco_trans_17. [Graphical view]
KO	K00737.
PANTHER	PTHR12224. Glyco_trans_17. 1 hit.
Pfam	PF04724. Glyco_transf_17. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5YRW2_SORBI

Accession

Primary (citable) accession number: C5YRW2

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	December 14, 2011
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)