C5YN64 (C5YN64_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb07g024070 EMBL EES15173.1

Gene names

Name:	Sb07g024070 EMBL EES15173.1
ORF Names:	SORBIDRAFT_07g024070 EMBL EES15173.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare)

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	591 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	branched chain family amino acid biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	dihydroxy-acid dehydratase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5YN64 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: 145DD23264B06E33	FASTA	591	63,181
	10 20 30 40 50 60 MQSMALTSPS LPAAGPVTGR RLQRVRATAV SDEPKLNKYS ARITEPKSQG ASQAVLYGVG 70 80 90 100 110 120 LTDADLRKPQ VGVSSVWYEG NTCNMHLLRL AEAVRDGVRE AGMVGFRFNT VGVSDAISMG 130 140 150 160 170 180 TRGMCYSLQS RDLIADSIET VMGAQHYDAN ISIPGCDKNM PGTIMAMGRL NRPSIMIYGG 190 200 210 220 230 240 TIKPGHFQGN SYDIVSAFQC YGEYVSGSIT DEQRKNVLRN SCPGAGACGG MYTANTMASA 250 260 270 280 290 300 IETLGMSLPY SSSTPAEDPL KLEECHLAGK YLLELLKMDL KPKDIITEKS LRNAMVIVMA 310 320 330 340 350 360 LGGSTNAVLH LIAIARSVGL HLTLDDFQKV SDQVPFLADL KPSGKYVMED LHKIGGTPAV 370 380 390 400 410 420 IHYLLEQGLL DGDCMTVTGK TLAENAKIFP PLSEGQQIIR PLDNPIKSTG HIQILYGNLA 430 440 450 460 470 480 PEGSVAKITG KEGLFFSGPA LVFEGEESMI TAISENPANF KGKVVVIRGE GPKGGPGMPE 490 500 510 520 530 540 MLTPTSAIMG AGLGKECALL TDGRFSGGSH GFVVGHICPE AQEGGPIGLV QSGDVITIDV 550 560 570 580 590 SKRVIDVDLT EQQLEERRRK WTPPPYKSTR GALWKYIKLV APASRGCVTD E

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed: 19189423] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000766 Genomic DNA. Translation: EES15173.1.
RefSeq	XP_002445678.1. XM_002445633.1.
UniGene	Sbi.2254.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C5YN64.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb07g024070.1; Sb07g024070.1; Sb07g024070.
GeneID	8057977.
KEGG	sbi:SORBI_07g024070.
Phylogenomic databases
GeneTree	EPGT00050000016987.
OMA	NMPGAMI.
PhylomeDB	C5YN64.
ProtClustDB	CLSN2684349.
Family and domain databases
HAMAP	MF_00012. IlvD. [Tree]
InterPro	IPR015928. Aconitase/3IPM_dehydase_swvl. IPR004404. DihydroxyA_deHydtase. IPR000581. DiOHA_6PGluconate_deHydtase. IPR020558. DiOHA_6PGluconate_deHydtase_CS. [Graphical view]
KO	K01687.
PANTHER	PTHR21000. ILVD_EDD_family. 1 hit.
Pfam	PF00920. ILVD_EDD. 1 hit. [Graphical view]
SUPFAM	SSF52016. Aconitase/3IPM_dehydase_swvl. 1 hit.
TIGRFAMs	TIGR00110. IlvD. 1 hit.
PROSITE	PS00886. ILVD_EDD_1. 1 hit. PS00887. ILVD_EDD_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5YN64_SORBI

Accession

Primary (citable) accession number: C5YN64

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	December 14, 2011
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)