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Protein
Submitted name:

Putative uncharacterized protein Sb07g023560

Gene

Sb07g023560

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. histone-lysine N-methyltransferase activity Source: InterPro
  2. zinc ion binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein Sb07g023560Imported
Gene namesi
Name:Sb07g023560Imported
ORF Names:SORBIDRAFT_07g023560Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
ProteomesiUP000000768 Componenti: Chromosome 7

Organism-specific databases

GrameneiC5YMQ8.

Subcellular locationi

Nucleus UniRule annotation

GO - Cellular componenti

  1. chromosome Source: UniProtKB-KW
  2. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

ChromosomeSAAS annotation, NucleusUniRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb07g023560.1.

Family & Domainsi

Sequence similaritiesi

Contains 1 SET domain.UniRule annotation
Contains 1 pre-SET domain.UniRule annotation
Contains SET domain.SAAS annotation
Contains pre-SET domain.SAAS annotation

Phylogenomic databases

eggNOGiCOG3440.
HOGENOMiHOG000238382.
InParanoidiC5YMQ8.
KOiK11420.

Family and domain databases

Gene3Di2.30.280.10. 1 hit.
InterProiIPR025794. Hist-Lys_N-MeTrfase_plant.
IPR007728. Pre-SET_dom.
IPR015947. PUA-like_domain.
IPR001214. SET_dom.
IPR003105. SRA_YDG.
[Graphical view]
PfamiPF05033. Pre-SET. 1 hit.
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00317. SET. 1 hit.
[Graphical view]
SUPFAMiSSF88697. SSF88697. 1 hit.
PROSITEiPS50867. PRE_SET. 1 hit.
PS51575. SAM_MT43_SUVAR39_2. 1 hit.
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5YMQ8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METSPPPPPP PPPPPQIDHL LSQFPIIPKP DPDGPTPAQT PAPIAERSAA
60 70 80 90 100
LMLALTPELC QVLHRELAPS PDDDPYFARC LRQSQLHLEA LAASLRPPSS
110 120 130 140 150
SSSSSSAAAA AASLARVLPP PPPPQKELRT QLQREPGAGG GSNPSSSKKR
160 170 180 190 200
ARASTEVVRA THLSPADHLR YRALVRRARL TFEALRSTYQ RQETSSGVRN
210 220 230 240 250
RHDLRASRQM LSAGHWLHRE VRIVGDIPGV FVGDAFYYRA EICVVGLHTM
260 270 280 290 300
PQAGIGYIPG SLLNEGDPVA TSIVSSGGYL DDEDTGDVLV YTGSGGRQRN
310 320 330 340 350
RVDHHANQTL ERGNLALHNS YLYGVEVRVI RGHDIDQGPH RKVYVYDGLY
360 370 380 390 400
RVIESTFGPG KSGHDVCKFK LVRLPGQDDL ASKTWHTAKL LKESMDARIR
410 420 430 440 450
PPRYISLDLS KGAELLRVPV CNKVDNDRSP LLFEYIAQPE FPVRPAHVPV
460 470 480 490 500
KQHGGCHCAG GCGSKCRCER KNGGEPVYTE DDILVMGRPV VYECGALCGC
510 520 530 540 550
PMTCVNRVTQ RGMKHRLEVF RSIETGWGVR ALDLIQPGAF VCEYTGHVVV
560 570 580 590 600
MDDQPGSALE GRSIIDPRRF PERWKEWGDA SAVEPNMKRL QFAKFAGPGY
610 620 630 640 650
VLDVSHKRNV ACYISHSCTP NVFLQFVLRG NEDESFPHLM VFAMETIPPM
660
RELSIDYGID MELSAI
Length:666
Mass (Da):73,365
Last modified:September 1, 2009 - v1
Checksum:i28C9CA16689A4620
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000766 Genomic DNA. Translation: EES14036.1.
RefSeqiXP_002444541.1. XM_002444496.1.

Genome annotation databases

EnsemblPlantsiSb07g023560.1; Sb07g023560.1; Sb07g023560.
GeneIDi8054815.
KEGGisbi:SORBI_07g023560.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000766 Genomic DNA. Translation: EES14036.1.
RefSeqiXP_002444541.1. XM_002444496.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4558.Sb07g023560.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiSb07g023560.1; Sb07g023560.1; Sb07g023560.
GeneIDi8054815.
KEGGisbi:SORBI_07g023560.

Organism-specific databases

GrameneiC5YMQ8.

Phylogenomic databases

eggNOGiCOG3440.
HOGENOMiHOG000238382.
InParanoidiC5YMQ8.
KOiK11420.

Family and domain databases

Gene3Di2.30.280.10. 1 hit.
InterProiIPR025794. Hist-Lys_N-MeTrfase_plant.
IPR007728. Pre-SET_dom.
IPR015947. PUA-like_domain.
IPR001214. SET_dom.
IPR003105. SRA_YDG.
[Graphical view]
PfamiPF05033. Pre-SET. 1 hit.
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00317. SET. 1 hit.
[Graphical view]
SUPFAMiSSF88697. SSF88697. 1 hit.
PROSITEiPS50867. PRE_SET. 1 hit.
PS51575. SAM_MT43_SUVAR39_2. 1 hit.
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. BTx623Imported.

Entry informationi

Entry nameiC5YMQ8_SORBI
AccessioniPrimary (citable) accession number: C5YMQ8
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: February 4, 2015
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.