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C5YMQ8 (C5YMQ8_SORBI) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Sb07g023560 EMBL EES14036.1
ORF Names:SORBIDRAFT_07g023560 EMBL EES14036.1
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare) [Reference proteome]
Taxonomic identifier4558 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum

Protein attributes

Sequence length666 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone]. RuleBase RU004542 SAAS SAAS007728

S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N(6)-methyl-L-lysine.

Subcellular location

Nucleus By similarity RuleBase RU004542.

Sequence similarities

Contains 1 SET domain. RuleBase RU004538

Contains 1 pre-SET domain. RuleBase RU004542

Contains SET domain. SAAS SAAS001214

Contains pre-SET domain. SAAS SAAS001214

Sequences

Sequence LengthMass (Da)Tools
C5YMQ8 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 28C9CA16689A4620

FASTA66673,365
        10         20         30         40         50         60 
METSPPPPPP PPPPPQIDHL LSQFPIIPKP DPDGPTPAQT PAPIAERSAA LMLALTPELC 

        70         80         90        100        110        120 
QVLHRELAPS PDDDPYFARC LRQSQLHLEA LAASLRPPSS SSSSSSAAAA AASLARVLPP 

       130        140        150        160        170        180 
PPPPQKELRT QLQREPGAGG GSNPSSSKKR ARASTEVVRA THLSPADHLR YRALVRRARL 

       190        200        210        220        230        240 
TFEALRSTYQ RQETSSGVRN RHDLRASRQM LSAGHWLHRE VRIVGDIPGV FVGDAFYYRA 

       250        260        270        280        290        300 
EICVVGLHTM PQAGIGYIPG SLLNEGDPVA TSIVSSGGYL DDEDTGDVLV YTGSGGRQRN 

       310        320        330        340        350        360 
RVDHHANQTL ERGNLALHNS YLYGVEVRVI RGHDIDQGPH RKVYVYDGLY RVIESTFGPG 

       370        380        390        400        410        420 
KSGHDVCKFK LVRLPGQDDL ASKTWHTAKL LKESMDARIR PPRYISLDLS KGAELLRVPV 

       430        440        450        460        470        480 
CNKVDNDRSP LLFEYIAQPE FPVRPAHVPV KQHGGCHCAG GCGSKCRCER KNGGEPVYTE 

       490        500        510        520        530        540 
DDILVMGRPV VYECGALCGC PMTCVNRVTQ RGMKHRLEVF RSIETGWGVR ALDLIQPGAF 

       550        560        570        580        590        600 
VCEYTGHVVV MDDQPGSALE GRSIIDPRRF PERWKEWGDA SAVEPNMKRL QFAKFAGPGY 

       610        620        630        640        650        660 
VLDVSHKRNV ACYISHSCTP NVFLQFVLRG NEDESFPHLM VFAMETIPPM RELSIDYGID 


MELSAI 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000766 Genomic DNA. Translation: EES14036.1.
RefSeqXP_002444541.1. XM_002444496.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING4558.Sb07g023560.1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsSb07g023560.1; Sb07g023560.1; Sb07g023560.
GeneID8054815.
KEGGsbi:SORBI_07g023560.

Organism-specific databases

GrameneC5YMQ8.

Phylogenomic databases

eggNOGCOG3440.
HOGENOMHOG000238382.
KOK11420.
ProtClustDBCLSN2697579.

Family and domain databases

Gene3D2.30.280.10. 1 hit.
InterProIPR025794. Hist-Lys_N-MeTrfase_plant.
IPR007728. Pre-SET_dom.
IPR015947. PUA-like_domain.
IPR001214. SET_dom.
IPR003105. SRA_YDG.
[Graphical view]
PfamPF05033. Pre-SET. 1 hit.
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
SMARTSM00317. SET. 1 hit.
[Graphical view]
SUPFAMSSF88697. SSF88697. 1 hit.
PROSITEPS50867. PRE_SET. 1 hit.
PS51575. SAM_MT43_SUVAR39_2. 1 hit.
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5YMQ8_SORBI
AccessionPrimary (citable) accession number: C5YMQ8
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: April 16, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)