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C5YMQ8

- C5YMQ8_SORBI

UniProt

C5YMQ8 - C5YMQ8_SORBI

Protein
Submitted name:

Putative uncharacterized protein Sb07g023560

Gene

Sb07g023560

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 36 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N(6)-methyl-L-lysine.

    GO - Molecular functioni

    1. histone-lysine N-methyltransferase activity Source: InterPro
    2. zinc ion binding Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized protein Sb07g023560Imported
    Gene namesi
    Name:Sb07g023560Imported
    ORF Names:SORBIDRAFT_07g023560Imported
    OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
    Taxonomic identifieri4558 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
    ProteomesiUP000000768: Chromosome 7

    Organism-specific databases

    GrameneiC5YMQ8.

    Subcellular locationi

    Nucleus UniRule annotation

    GO - Cellular componenti

    1. chromosome Source: UniProtKB-KW
    2. nucleus Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    ChromosomeSAAS annotation, NucleusUniRule annotationSAAS annotation

    Interactioni

    Protein-protein interaction databases

    STRINGi4558.Sb07g023560.1.

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 SET domain.UniRule annotation
    Contains 1 pre-SET domain.
    Contains SET domain.SAAS annotation
    Contains pre-SET domain.SAAS annotation

    Phylogenomic databases

    eggNOGiCOG3440.
    HOGENOMiHOG000238382.
    KOiK11420.

    Family and domain databases

    Gene3Di2.30.280.10. 1 hit.
    InterProiIPR025794. Hist-Lys_N-MeTrfase_plant.
    IPR007728. Pre-SET_dom.
    IPR015947. PUA-like_domain.
    IPR001214. SET_dom.
    IPR003105. SRA_YDG.
    [Graphical view]
    PfamiPF05033. Pre-SET. 1 hit.
    PF02182. SAD_SRA. 1 hit.
    PF00856. SET. 1 hit.
    [Graphical view]
    SMARTiSM00317. SET. 1 hit.
    [Graphical view]
    SUPFAMiSSF88697. SSF88697. 1 hit.
    PROSITEiPS50867. PRE_SET. 1 hit.
    PS51575. SAM_MT43_SUVAR39_2. 1 hit.
    PS50280. SET. 1 hit.
    PS51015. YDG. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C5YMQ8-1 [UniParc]FASTAAdd to Basket

    « Hide

    METSPPPPPP PPPPPQIDHL LSQFPIIPKP DPDGPTPAQT PAPIAERSAA    50
    LMLALTPELC QVLHRELAPS PDDDPYFARC LRQSQLHLEA LAASLRPPSS 100
    SSSSSSAAAA AASLARVLPP PPPPQKELRT QLQREPGAGG GSNPSSSKKR 150
    ARASTEVVRA THLSPADHLR YRALVRRARL TFEALRSTYQ RQETSSGVRN 200
    RHDLRASRQM LSAGHWLHRE VRIVGDIPGV FVGDAFYYRA EICVVGLHTM 250
    PQAGIGYIPG SLLNEGDPVA TSIVSSGGYL DDEDTGDVLV YTGSGGRQRN 300
    RVDHHANQTL ERGNLALHNS YLYGVEVRVI RGHDIDQGPH RKVYVYDGLY 350
    RVIESTFGPG KSGHDVCKFK LVRLPGQDDL ASKTWHTAKL LKESMDARIR 400
    PPRYISLDLS KGAELLRVPV CNKVDNDRSP LLFEYIAQPE FPVRPAHVPV 450
    KQHGGCHCAG GCGSKCRCER KNGGEPVYTE DDILVMGRPV VYECGALCGC 500
    PMTCVNRVTQ RGMKHRLEVF RSIETGWGVR ALDLIQPGAF VCEYTGHVVV 550
    MDDQPGSALE GRSIIDPRRF PERWKEWGDA SAVEPNMKRL QFAKFAGPGY 600
    VLDVSHKRNV ACYISHSCTP NVFLQFVLRG NEDESFPHLM VFAMETIPPM 650
    RELSIDYGID MELSAI 666
    Length:666
    Mass (Da):73,365
    Last modified:September 1, 2009 - v1
    Checksum:i28C9CA16689A4620
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000766 Genomic DNA. Translation: EES14036.1.
    RefSeqiXP_002444541.1. XM_002444496.1.

    Genome annotation databases

    EnsemblPlantsiSb07g023560.1; Sb07g023560.1; Sb07g023560.
    GeneIDi8054815.
    KEGGisbi:SORBI_07g023560.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000766 Genomic DNA. Translation: EES14036.1 .
    RefSeqi XP_002444541.1. XM_002444496.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 4558.Sb07g023560.1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi Sb07g023560.1 ; Sb07g023560.1 ; Sb07g023560 .
    GeneIDi 8054815.
    KEGGi sbi:SORBI_07g023560.

    Organism-specific databases

    Gramenei C5YMQ8.

    Phylogenomic databases

    eggNOGi COG3440.
    HOGENOMi HOG000238382.
    KOi K11420.

    Family and domain databases

    Gene3Di 2.30.280.10. 1 hit.
    InterProi IPR025794. Hist-Lys_N-MeTrfase_plant.
    IPR007728. Pre-SET_dom.
    IPR015947. PUA-like_domain.
    IPR001214. SET_dom.
    IPR003105. SRA_YDG.
    [Graphical view ]
    Pfami PF05033. Pre-SET. 1 hit.
    PF02182. SAD_SRA. 1 hit.
    PF00856. SET. 1 hit.
    [Graphical view ]
    SMARTi SM00317. SET. 1 hit.
    [Graphical view ]
    SUPFAMi SSF88697. SSF88697. 1 hit.
    PROSITEi PS50867. PRE_SET. 1 hit.
    PS51575. SAM_MT43_SUVAR39_2. 1 hit.
    PS50280. SET. 1 hit.
    PS51015. YDG. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. BTx623Imported.

    Entry informationi

    Entry nameiC5YMQ8_SORBI
    AccessioniPrimary (citable) accession number: C5YMQ8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 36 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3