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C5YKQ6

- C5YKQ6_SORBI

UniProt

C5YKQ6 - C5YKQ6_SORBI

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Protein
Submitted name:

Putative uncharacterized protein Sb07g019863

Gene
Sb07g019863, SORBIDRAFT_07g019863
Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone].UniRule annotationSAAS annotations

GO - Molecular functioni

  1. histone-lysine N-methyltransferase activity Source: InterPro
  2. zinc ion binding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseUniRule annotation, Transferase

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein Sb07g019863Imported
Gene namesi
Name:Sb07g019863Imported
ORF Names:SORBIDRAFT_07g019863Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
ProteomesiUP000000768: Chromosome 7

Organism-specific databases

GrameneiC5YKQ6.

Subcellular locationi

Nucleus By similarity

GO - Cellular componenti

  1. chromosome Source: UniProtKB-KW
  2. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

ChromosomeSAAS annotations, NucleusUniRule annotationSAAS annotations

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb07g019863.1.

Family & Domainsi

Sequence similaritiesi

Contains 1 SET domain.UniRule annotation
Contains 1 post-SET domain.UniRule annotation
Contains 1 pre-SET domain.
Contains SET domain.SAAS annotations
Contains pre-SET domain.SAAS annotations

Phylogenomic databases

eggNOGiCOG2940.
HOGENOMiHOG000084575.
KOiK11420.

Family and domain databases

Gene3Di2.30.280.10. 1 hit.
InterProiIPR025794. Hist-Lys_N-MeTrfase_plant.
IPR003616. Post-SET_dom.
IPR007728. Pre-SET_dom.
IPR015947. PUA-like_domain.
IPR001214. SET_dom.
IPR003105. SRA_YDG.
[Graphical view]
PfamiPF05033. Pre-SET. 1 hit.
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00508. PostSET. 1 hit.
SM00317. SET. 1 hit.
[Graphical view]
SUPFAMiSSF88697. SSF88697. 1 hit.
PROSITEiPS50868. POST_SET. 1 hit.
PS50867. PRE_SET. 1 hit.
PS51575. SAM_MT43_SUVAR39_2. 1 hit.
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

C5YKQ6-1 [UniParc]FASTAAdd to Basket

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DARSKVRKLL QLYRVTCQKL TQVEVQGNPI VGRIYLEAAK IVKKDPIYAK    50
LGAIVGNIPG VEVGDEFYYR IELAIVGLHR LHQGGIDTSK VNGVPIAISV 100
VASGGYRDEL SSSGELIYTG SGGKAGGNKD GDDQKLEWGN LALKNCIETK 150
TPVRVIHGFK GQNRSEFGKE TSTFTYDGLY EVVECWREGP KGGMVFKYKL 200
WRIAGQPKLT LHVVKAIRKS KSREGLCLPD ISQGSERIPI CVINTVDDMR 250
LAPLKYITKL TYPTWCEIVP QNGCNCTNHC SDTIRCSCAW KNGGEIPFNC 300
DNAIVKAKRL IYECGPWCRC PPTCYNRVSQ HGVKIPLEIF KTGKTGWGVR 350
SLSSISSGSF ICEYTGELLK GEEAENRQND EYLFDIGRNY YDEELWEGIP 400
PVVDVQSSTS SSGTMKGFTI DGAECSNVGR FINHSCSPNL YAQNVLWDHG 450
NMKMPHIMLF AVENIPPLQE LTYHYNYKVG SVHDENGNEK VKHCYCGASA 500
CRGRLY 506
Length:506
Mass (Da):56,286
Last modified:September 1, 2009 - v1
Checksum:iEFC2481B9E43C160
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported
Non-terminal residuei506 – 5061Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000766 Genomic DNA. Translation: EES14954.1.
RefSeqiXP_002445459.1. XM_002445414.1.

Genome annotation databases

EnsemblPlantsiSb07g019863.1; Sb07g019863.1; Sb07g019863.
GeneIDi8070041.
KEGGisbi:SORBI_07g019863.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000766 Genomic DNA. Translation: EES14954.1 .
RefSeqi XP_002445459.1. XM_002445414.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 4558.Sb07g019863.1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi Sb07g019863.1 ; Sb07g019863.1 ; Sb07g019863 .
GeneIDi 8070041.
KEGGi sbi:SORBI_07g019863.

Organism-specific databases

Gramenei C5YKQ6.

Phylogenomic databases

eggNOGi COG2940.
HOGENOMi HOG000084575.
KOi K11420.

Family and domain databases

Gene3Di 2.30.280.10. 1 hit.
InterProi IPR025794. Hist-Lys_N-MeTrfase_plant.
IPR003616. Post-SET_dom.
IPR007728. Pre-SET_dom.
IPR015947. PUA-like_domain.
IPR001214. SET_dom.
IPR003105. SRA_YDG.
[Graphical view ]
Pfami PF05033. Pre-SET. 1 hit.
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
[Graphical view ]
SMARTi SM00508. PostSET. 1 hit.
SM00317. SET. 1 hit.
[Graphical view ]
SUPFAMi SSF88697. SSF88697. 1 hit.
PROSITEi PS50868. POST_SET. 1 hit.
PS50867. PRE_SET. 1 hit.
PS51575. SAM_MT43_SUVAR39_2. 1 hit.
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. BTx623.

Entry informationi

Entry nameiC5YKQ6_SORBI
AccessioniPrimary (citable) accession number: C5YKQ6
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: July 9, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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