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C5YKQ6 (C5YKQ6_SORBI) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:Sb07g019863 EMBL EES14954.1
ORF Names:SORBIDRAFT_07g019863 EMBL EES14954.1
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare) [Reference proteome]
Taxonomic identifier4558 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum

Protein attributes

Sequence length506 AA.
Sequence statusFragment.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone]. RuleBase RU004542 SAAS SAAS001214

Subcellular location

Nucleus By similarity.

Sequence similarities

Contains 1 SET domain. RuleBase RU004538

Contains 1 post-SET domain. RuleBase RU004541

Contains 1 pre-SET domain.

Contains SET domain. SAAS SAAS001214

Contains pre-SET domain. SAAS SAAS001214

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL EES14954.1
Non-terminal residue5061 EMBL EES14954.1

Sequences

Sequence LengthMass (Da)Tools
C5YKQ6 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: EFC2481B9E43C160

FASTA50656,286
        10         20         30         40         50         60 
DARSKVRKLL QLYRVTCQKL TQVEVQGNPI VGRIYLEAAK IVKKDPIYAK LGAIVGNIPG 

        70         80         90        100        110        120 
VEVGDEFYYR IELAIVGLHR LHQGGIDTSK VNGVPIAISV VASGGYRDEL SSSGELIYTG 

       130        140        150        160        170        180 
SGGKAGGNKD GDDQKLEWGN LALKNCIETK TPVRVIHGFK GQNRSEFGKE TSTFTYDGLY 

       190        200        210        220        230        240 
EVVECWREGP KGGMVFKYKL WRIAGQPKLT LHVVKAIRKS KSREGLCLPD ISQGSERIPI 

       250        260        270        280        290        300 
CVINTVDDMR LAPLKYITKL TYPTWCEIVP QNGCNCTNHC SDTIRCSCAW KNGGEIPFNC 

       310        320        330        340        350        360 
DNAIVKAKRL IYECGPWCRC PPTCYNRVSQ HGVKIPLEIF KTGKTGWGVR SLSSISSGSF 

       370        380        390        400        410        420 
ICEYTGELLK GEEAENRQND EYLFDIGRNY YDEELWEGIP PVVDVQSSTS SSGTMKGFTI 

       430        440        450        460        470        480 
DGAECSNVGR FINHSCSPNL YAQNVLWDHG NMKMPHIMLF AVENIPPLQE LTYHYNYKVG 

       490        500 
SVHDENGNEK VKHCYCGASA CRGRLY 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000766 Genomic DNA. Translation: EES14954.1.
RefSeqXP_002445459.1. XM_002445414.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING4558.Sb07g019863.1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsSb07g019863.1; Sb07g019863.1; Sb07g019863.
GeneID8070041.
KEGGsbi:SORBI_07g019863.

Organism-specific databases

GrameneC5YKQ6.

Phylogenomic databases

eggNOGCOG2940.
HOGENOMHOG000084575.
KOK11420.

Family and domain databases

Gene3D2.30.280.10. 1 hit.
InterProIPR025794. Hist-Lys_N-MeTrfase_plant.
IPR003616. Post-SET_dom.
IPR007728. Pre-SET_dom.
IPR015947. PUA-like_domain.
IPR001214. SET_dom.
IPR003105. SRA_YDG.
[Graphical view]
PfamPF05033. Pre-SET. 1 hit.
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
SMARTSM00508. PostSET. 1 hit.
SM00317. SET. 1 hit.
[Graphical view]
SUPFAMSSF88697. SSF88697. 1 hit.
PROSITEPS50868. POST_SET. 1 hit.
PS50867. PRE_SET. 1 hit.
PS51575. SAM_MT43_SUVAR39_2. 1 hit.
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5YKQ6_SORBI
AccessionPrimary (citable) accession number: C5YKQ6
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: July 9, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)