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Protein

Histone-lysine N-methyltransferase

Gene

Sb07g019860

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Catalytic activityi

S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone].SAAS annotation

GO - Molecular functioni

  1. histone-lysine N-methyltransferase activity Source: InterPro
  2. zinc ion binding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseUniRule annotationSAAS annotation, Transferase

Keywords - Ligandi

S-adenosyl-L-methionineSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Histone-lysine N-methyltransferaseSAAS annotation (EC:2.1.1.43SAAS annotation)
Gene namesi
Name:Sb07g019860Imported
ORF Names:SORBIDRAFT_07g019860Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
ProteomesiUP000000768: Chromosome 7

Organism-specific databases

GrameneiC5YKQ5.

Subcellular locationi

Nucleus UniRule annotation

GO - Cellular componenti

  1. chromosome Source: UniProtKB-KW
  2. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

ChromosomeSAAS annotation, NucleusUniRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb07g019860.1.

Family & Domainsi

Sequence similaritiesi

Contains 1 SET domain.UniRule annotation
Contains 1 post-SET domain.UniRule annotation
Contains 1 pre-SET domain.UniRule annotation
Contains SET domain.SAAS annotation
Contains post-SET domain.SAAS annotation
Contains pre-SET domain.SAAS annotation

Phylogenomic databases

eggNOGiCOG3440.
HOGENOMiHOG000084575.
InParanoidiC5YKQ5.
KOiK11420.

Family and domain databases

Gene3Di2.30.280.10. 1 hit.
InterProiIPR025794. Hist-Lys_N-MeTrfase_plant.
IPR003616. Post-SET_dom.
IPR007728. Pre-SET_dom.
IPR015947. PUA-like_domain.
IPR001214. SET_dom.
IPR003105. SRA_YDG.
[Graphical view]
PfamiPF05033. Pre-SET. 1 hit.
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00508. PostSET. 1 hit.
SM00317. SET. 1 hit.
[Graphical view]
SUPFAMiSSF88697. SSF88697. 1 hit.
PROSITEiPS50868. POST_SET. 1 hit.
PS50867. PRE_SET. 1 hit.
PS51575. SAM_MT43_SUVAR39_2. 1 hit.
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5YKQ5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDSYAARLDV ARQPRLPVPG PAAGRVGRAC PPQRADHRGR PPASPRGCGG
60 70 80 90 100
DTRRAGGLRE HGVVAAAVAA TAIAAGSVGD DAAAGVAAAM VAREETGGSE
110 120 130 140 150
VGSKRCLPLA AAHPPPKRRA VSARRRFPPQ CGRNVAAPLA TANNASRFGD
160 170 180 190 200
AGAEVCSAVL DLEKTAASSP LAGGKDGALL GAVSPVSAAT SLVKQLCAVD
210 220 230 240 250
GDAPMADGGH HGPQPGVVKS SEALRRSGGT AVDGLLDGGS QGVAAVSMED
260 270 280 290 300
RGKGAWSGEL GRKELVPDAH LQANPRMSLD ERSFPLGYGK DAVLSLLLAG
310 320 330 340 350
GSSKVCLPLK SRPTDKLGVL EEAVVATHGC ISSVQGHYIK IVSNDGTVQD
360 370 380 390 400
YELEDGEIPP ELVVQESQVS TGVALHESTD CRHGPSVPEV NAKETFAMQP
410 420 430 440 450
CNEKTGGDTL QCGEKISSYL VANDVEVVNK SIGSSVNVVA ASLAEDLSKQ
460 470 480 490 500
NMVGKRVSES AMMNIVDVTA GGCGNGTTMR CVTMHDSAAC RHGDSVPEIS
510 520 530 540 550
AVETSVMQSS NEKTGGNILQ CGDKKSSCLV TKDIEVMNKS IRISCTAVAG
560 570 580 590 600
PLAEDSFKQN LMGKRVSESA RMNRASDDVA AATSGNSIMM RSKVRFTPRK
610 620 630 640 650
VIKLSKVIQK STLDTRHRHC PEDREKETEL SRRGIINKIE DTDKLTKDRV
660 670 680 690 700
LQAPMTQEKE AATTRGFFGP RKRVKVKVPA HLQMKIASTC ALGCKVKLDD
710 720 730 740 750
KVASSLDDDD ILKALVVNEG NLELFLNSYS SLTSARCQMK HGSQNADARS
760 770 780 790 800
KFKMLCRRFE FVCRALVQAV EQNSLKIRRI DLQADRVIRK LPGFTKSGPI
810 820 830 840 850
VGQVPGVQVG DEFLYRVQLA IVGLHLAYQG GIDTTIYRNG ERIAISIVAS
860 870 880 890 900
GGYPDELSSS GELIYSGSGG KPAGKKDHED QKLERGNLAL KNCIKTKTPV
910 920 930 940 950
RVIYGFKAQN NRVGSHSRAR EVSTFTYDGL YRVLDFWMDG QPGSRVFKYK
960 970 980 990 1000
LKKIPGQPKL PMHMAEGMRK SKTRPGLCEI DISQGKEGIP ICVINTVDTE
1010 1020 1030 1040 1050
RPAPFRYTTR IRYPFELTKK RHQGCDCTNG CSDSVSCACA VKNGGEIPFN
1060 1070 1080 1090 1100
LNGAIVNEKP LIFECGPSCK CPPSCQNKVS QHGLKIPLEV FKTTKTGWGV
1110 1120 1130 1140 1150
RSLRSISSGS FICEYVGELL YGNEADERRN SNFLFDIGLN HGDENFCNGL
1160 1170 1180 1190 1200
LSDVSDMKSS SSSSQILGDV GFTIDSAECG NIGRFINHSC SPNLYAQNVL
1210 1220 1230 1240 1250
WDHDDLRIPH IMFFAAETIP PLQELTYDYN YEIDHVEDVN GRIKFKVCQC
1260
GSSGCSGRLY
Length:1,260
Mass (Da):135,107
Last modified:September 1, 2009 - v1
Checksum:iB3BA5071A06E30E5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000766 Genomic DNA. Translation: EES13798.1.
RefSeqiXP_002444303.1. XM_002444258.1.

Genome annotation databases

EnsemblPlantsiSb07g019860.1; Sb07g019860.1; Sb07g019860.
GeneIDi8070040.
KEGGisbi:SORBI_07g019860.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000766 Genomic DNA. Translation: EES13798.1.
RefSeqiXP_002444303.1. XM_002444258.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4558.Sb07g019860.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiSb07g019860.1; Sb07g019860.1; Sb07g019860.
GeneIDi8070040.
KEGGisbi:SORBI_07g019860.

Organism-specific databases

GrameneiC5YKQ5.

Phylogenomic databases

eggNOGiCOG3440.
HOGENOMiHOG000084575.
InParanoidiC5YKQ5.
KOiK11420.

Family and domain databases

Gene3Di2.30.280.10. 1 hit.
InterProiIPR025794. Hist-Lys_N-MeTrfase_plant.
IPR003616. Post-SET_dom.
IPR007728. Pre-SET_dom.
IPR015947. PUA-like_domain.
IPR001214. SET_dom.
IPR003105. SRA_YDG.
[Graphical view]
PfamiPF05033. Pre-SET. 1 hit.
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00508. PostSET. 1 hit.
SM00317. SET. 1 hit.
[Graphical view]
SUPFAMiSSF88697. SSF88697. 1 hit.
PROSITEiPS50868. POST_SET. 1 hit.
PS50867. PRE_SET. 1 hit.
PS51575. SAM_MT43_SUVAR39_2. 1 hit.
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. BTx623Imported.

Entry informationi

Entry nameiC5YKQ5_SORBI
AccessioniPrimary (citable) accession number: C5YKQ5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: February 4, 2015
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.