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C5YKQ5 (C5YKQ5_SORBI) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Sb07g019860 EMBL EES13798.1
ORF Names:SORBIDRAFT_07g019860 EMBL EES13798.1
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare) [Reference proteome]
Taxonomic identifier4558 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum

Protein attributes

Sequence length1260 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone]. RuleBase RU004542 SAAS SAAS001214

S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N(6)-methyl-L-lysine.

Subcellular location

Nucleus By similarity RuleBase RU004542.

Sequence similarities

Contains 1 SET domain.

Contains 1 post-SET domain. RuleBase RU004541

Contains 1 pre-SET domain. RuleBase RU004542

Contains SET domain. SAAS SAAS001214

Contains post-SET domain. SAAS SAAS001214

Contains pre-SET domain. SAAS SAAS001214

Sequences

Sequence LengthMass (Da)Tools
C5YKQ5 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: B3BA5071A06E30E5

FASTA1,260135,107
        10         20         30         40         50         60 
MDSYAARLDV ARQPRLPVPG PAAGRVGRAC PPQRADHRGR PPASPRGCGG DTRRAGGLRE 

        70         80         90        100        110        120 
HGVVAAAVAA TAIAAGSVGD DAAAGVAAAM VAREETGGSE VGSKRCLPLA AAHPPPKRRA 

       130        140        150        160        170        180 
VSARRRFPPQ CGRNVAAPLA TANNASRFGD AGAEVCSAVL DLEKTAASSP LAGGKDGALL 

       190        200        210        220        230        240 
GAVSPVSAAT SLVKQLCAVD GDAPMADGGH HGPQPGVVKS SEALRRSGGT AVDGLLDGGS 

       250        260        270        280        290        300 
QGVAAVSMED RGKGAWSGEL GRKELVPDAH LQANPRMSLD ERSFPLGYGK DAVLSLLLAG 

       310        320        330        340        350        360 
GSSKVCLPLK SRPTDKLGVL EEAVVATHGC ISSVQGHYIK IVSNDGTVQD YELEDGEIPP 

       370        380        390        400        410        420 
ELVVQESQVS TGVALHESTD CRHGPSVPEV NAKETFAMQP CNEKTGGDTL QCGEKISSYL 

       430        440        450        460        470        480 
VANDVEVVNK SIGSSVNVVA ASLAEDLSKQ NMVGKRVSES AMMNIVDVTA GGCGNGTTMR 

       490        500        510        520        530        540 
CVTMHDSAAC RHGDSVPEIS AVETSVMQSS NEKTGGNILQ CGDKKSSCLV TKDIEVMNKS 

       550        560        570        580        590        600 
IRISCTAVAG PLAEDSFKQN LMGKRVSESA RMNRASDDVA AATSGNSIMM RSKVRFTPRK 

       610        620        630        640        650        660 
VIKLSKVIQK STLDTRHRHC PEDREKETEL SRRGIINKIE DTDKLTKDRV LQAPMTQEKE 

       670        680        690        700        710        720 
AATTRGFFGP RKRVKVKVPA HLQMKIASTC ALGCKVKLDD KVASSLDDDD ILKALVVNEG 

       730        740        750        760        770        780 
NLELFLNSYS SLTSARCQMK HGSQNADARS KFKMLCRRFE FVCRALVQAV EQNSLKIRRI 

       790        800        810        820        830        840 
DLQADRVIRK LPGFTKSGPI VGQVPGVQVG DEFLYRVQLA IVGLHLAYQG GIDTTIYRNG 

       850        860        870        880        890        900 
ERIAISIVAS GGYPDELSSS GELIYSGSGG KPAGKKDHED QKLERGNLAL KNCIKTKTPV 

       910        920        930        940        950        960 
RVIYGFKAQN NRVGSHSRAR EVSTFTYDGL YRVLDFWMDG QPGSRVFKYK LKKIPGQPKL 

       970        980        990       1000       1010       1020 
PMHMAEGMRK SKTRPGLCEI DISQGKEGIP ICVINTVDTE RPAPFRYTTR IRYPFELTKK 

      1030       1040       1050       1060       1070       1080 
RHQGCDCTNG CSDSVSCACA VKNGGEIPFN LNGAIVNEKP LIFECGPSCK CPPSCQNKVS 

      1090       1100       1110       1120       1130       1140 
QHGLKIPLEV FKTTKTGWGV RSLRSISSGS FICEYVGELL YGNEADERRN SNFLFDIGLN 

      1150       1160       1170       1180       1190       1200 
HGDENFCNGL LSDVSDMKSS SSSSQILGDV GFTIDSAECG NIGRFINHSC SPNLYAQNVL 

      1210       1220       1230       1240       1250       1260 
WDHDDLRIPH IMFFAAETIP PLQELTYDYN YEIDHVEDVN GRIKFKVCQC GSSGCSGRLY 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000766 Genomic DNA. Translation: EES13798.1.
RefSeqXP_002444303.1. XM_002444258.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING4558.Sb07g019860.1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsSb07g019860.1; Sb07g019860.1; Sb07g019860.
GeneID8070040.
KEGGsbi:SORBI_07g019860.

Organism-specific databases

GrameneC5YKQ5.

Phylogenomic databases

eggNOGCOG3440.
HOGENOMHOG000084575.
KOK11420.

Family and domain databases

Gene3D2.30.280.10. 1 hit.
InterProIPR025794. Hist-Lys_N-MeTrfase_plant.
IPR003616. Post-SET_dom.
IPR007728. Pre-SET_dom.
IPR015947. PUA-like_domain.
IPR001214. SET_dom.
IPR003105. SRA_YDG.
[Graphical view]
PfamPF05033. Pre-SET. 1 hit.
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
SMARTSM00508. PostSET. 1 hit.
SM00317. SET. 1 hit.
[Graphical view]
SUPFAMSSF88697. SSF88697. 1 hit.
PROSITEPS50868. POST_SET. 1 hit.
PS50867. PRE_SET. 1 hit.
PS51575. SAM_MT43_SUVAR39_2. 1 hit.
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5YKQ5_SORBI
AccessionPrimary (citable) accession number: C5YKQ5
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: July 9, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)