C5YC29 (C5YC29_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb06g022580 EMBL EES12512.1

Gene names

Name:	Sb06g022580 EMBL EES12512.1
ORF Names:	SORBIDRAFT_06g022580 EMBL EES12512.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare) [Reference proteome]

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › Liliopsida › commelinids › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	135 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: InterPro
Cellular_component	chloroplast Inferred from electronic annotation. Source: EnsemblPlants/Gramene cytosolic large ribosomal subunit Inferred from electronic annotation. Source: EnsemblPlants/Gramene endoplasmic reticulum Inferred from electronic annotation. Source: EnsemblPlants/Gramene nucleolus Inferred from electronic annotation. Source: EnsemblPlants/Gramene plasma membrane Inferred from electronic annotation. Source: EnsemblPlants/Gramene vacuole Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5YC29 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: 85C4610A025E9711	FASTA	135	15,489
	10 20 30 40 50 60 MPFKRFVEIG RVALVNYGKE YGRLVVIVDV VDQNRALVDA PDMVRCQMNF KRLSLTDIKI 70 80 90 100 110 120 DIKRVPKKTT LIKAMEEADV KTKWENSSWG KKLIVQKRRA SLNDFDRFKI MLAKIKRGGA 130 IRQELAKLKK VAAAA

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000765 Genomic DNA. Translation: EES12512.1.
RefSeq	XP_002448184.1. XM_002448139.1.
UniGene	Sbi.45.
3D structure databases
ProteinModelPortal	C5YC29.
ModBase	Search...
Protein-protein interaction databases
STRING	4558.Sb06g022580.1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb06g022580.1; Sb06g022580.1; Sb06g022580.
GeneID	8054273.
KEGG	sbi:SORBI_06g022580.
Organism-specific databases
Gramene	C5YC29.
Phylogenomic databases
eggNOG	COG2163.
HOGENOM	HOG000201693.
KO	K02875.
OMA	SWAKKIE.
ProtClustDB	CLSN2683317.
Family and domain databases
Gene3D	2.30.30.30. 1 hit.
InterPro	IPR014722. Rib_L2_dom2. IPR002784. Ribosomal_L14. [Graphical view]
Pfam	PF01929. Ribosomal_L14e. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5YC29_SORBI

Accession

Primary (citable) accession number: C5YC29

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	April 3, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)