C5YB33 (C5YB33_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb06g033930 EMBL EES13155.1

Gene names

Name:	Sb06g033930 EMBL EES13155.1
ORF Names:	SORBIDRAFT_06g033930 EMBL EES13155.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare)

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	545 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	GMP biosynthetic process Inferred from electronic annotation. Source: InterPro asparagine biosynthetic process Inferred from electronic annotation. Source: InterPro glutamine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: InterPro GMP synthase (glutamine-hydrolyzing) activity Inferred from electronic annotation. Source: InterPro asparagine synthase (glutamine-hydrolyzing) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5YB33 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: 105C05408084DCFA	FASTA	545	59,581
	10 20 30 40 50 60 MGSTAAASVL PVSAGTGQNL VLILDYGSQY THLITRRVRQ LGVLSLCVSG TAPLASLEGL 70 80 90 100 110 120 RPRAVILSGG PHSVHAPGAP AFPEGFLDFA AAAGAHVLGV CYGMQLLVQS LGGAVVPGER 130 140 150 160 170 180 QEYGKMDVQV TAASSALYGE AETGKRQTVW MSHGDEVVTL PQGFEVVARS VQGAVAAIEY 190 200 210 220 230 240 REKRFYGLQY HPEVTHSAQG METLRRFLFD VCGIKADWKM QDVLDEEIKT IQSTVGPDEH 250 260 270 280 290 300 VICALSGGVD STVAATLVHK AIGDRLHCVF VDNGLLRYKE RERVMTTFES DLHLPVTCVD 310 320 330 340 350 360 ASEQFLSKLK GVEDPEQKRK IIGREFIAVF DDFAHKLEQK IGKRPEYLVQ GTLYPDVIES 370 380 390 400 410 420 CPPPGSGRTH SHTIKSHHNV GGLPKDMKLK LIEPLKLLFK DEVRKLGSIL NVPDSFLKRH 430 440 450 460 470 480 PFPGPGLAVR VLGDVTQGNA LEVLRQVDEI FVQAIKDAGL YDKIWQAFAV FLPVQTVGVQ 490 500 510 520 530 540 GDQRTHSNAV VLRAITSEDG MTADWYYFDH AFLVDVVNKI CNNVRGINRV CQDITSKPPA TVEWE

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed: 19189423] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000765 Genomic DNA. Translation: EES13155.1.
RefSeq	XP_002448827.1. XM_002448782.1.
UniGene	Sbi.6995.
3D structure databases
ProteinModelPortal	C5YB33.
ModBase	Search...
Protein-protein interaction databases
STRING	C5YB33.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb06g033930.1; Sb06g033930.1; Sb06g033930.
GeneID	8076514.
KEGG	sbi:SORBI_06g033930.
Phylogenomic databases
GeneTree	EPGT00050000012801.
OMA	DGRTYEY.
PhylomeDB	C5YB33.
ProtClustDB	PLN02347.
Family and domain databases
HAMAP	MF_00344. GMP_synthase. [Tree]
InterPro	IPR001962. Asn_synthase. IPR017926. GATASE_1. IPR001674. GMP_synth_C. IPR004739. GMP_synth_N. IPR022955. GMP_synthase. IPR014729. Rossmann-like_a/b/a_fold. [Graphical view]
Gene3D	G3DSA:3.40.50.620. Rossmann-like_a/b/a_fold. 1 hit.
KO	K01951.
Pfam	PF00733. Asn_synthase. 1 hit. PF00117. GATase. 1 hit. PF00958. GMP_synt_C. 1 hit. [Graphical view]
TIGRFAMs	TIGR00884. GuaA_Cterm. 1 hit. TIGR00888. GuaA_Nterm. 1 hit.
PROSITE	PS51273. GATASE_TYPE_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5YB33_SORBI

Accession

Primary (citable) accession number: C5YB33

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	January 25, 2012
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)