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Protein
Submitted name:

Putative uncharacterized protein Sb06g020610

Gene

Sb06g020610

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. histone acetyltransferase activity Source: EnsemblPlants/Gramene
  2. iron-sulfur cluster binding Source: EnsemblPlants/Gramene
  3. metal ion binding Source: EnsemblPlants/Gramene

GO - Biological processi

  1. auxin-activated signaling pathway Source: EnsemblPlants/Gramene
  2. cell proliferation Source: EnsemblPlants/Gramene
  3. DNA mediated transformation Source: EnsemblPlants/Gramene
  4. organ growth Source: EnsemblPlants/Gramene
  5. protein maturation Source: EnsemblPlants/Gramene
  6. regulation of auxin mediated signaling pathway Source: EnsemblPlants/Gramene
  7. regulation of leaf formation Source: EnsemblPlants/Gramene
  8. regulation of transcription, DNA-templated Source: EnsemblPlants/Gramene
  9. specification of organ axis polarity Source: EnsemblPlants/Gramene
  10. transcription, DNA-templated Source: EnsemblPlants/Gramene
  11. tRNA wobble uridine modification Source: EnsemblPlants/Gramene
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein Sb06g020610Imported
Gene namesi
Name:Sb06g020610Imported
ORF Names:SORBIDRAFT_06g020610Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
ProteomesiUP000000768 Componenti: Chromosome 6

Organism-specific databases

GrameneiC5YAW5.

Subcellular locationi

GO - Cellular componenti

  1. cytosol Source: EnsemblPlants/Gramene
  2. Elongator holoenzyme complex Source: EnsemblPlants/Gramene
  3. nuclear euchromatin Source: EnsemblPlants/Gramene
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb06g020610.1.

Structurei

3D structure databases

ProteinModelPortaliC5YAW5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1243.
HOGENOMiHOG000227514.
InParanoidiC5YAW5.
KOiK07739.
OMAiGYKVVSH.

Family and domain databases

Gene3Di3.40.630.30. 1 hit.
3.80.30.20. 1 hit.
InterProiIPR016181. Acyl_CoA_acyltransferase.
IPR006638. Elp3/MiaB/NifB.
IPR000182. GNAT_dom.
IPR005910. Hist_AcTrfase_ELP3.
IPR007197. rSAM.
IPR023404. rSAM_horseshoe.
[Graphical view]
PfamiPF00583. Acetyltransf_1. 1 hit.
PF04055. Radical_SAM. 1 hit.
[Graphical view]
PIRSFiPIRSF005669. Hist_AcTrfase_ELP3. 1 hit.
SMARTiSM00729. Elp3. 1 hit.
[Graphical view]
SUPFAMiSSF55729. SSF55729. 1 hit.
TIGRFAMsiTIGR01211. ELP3. 1 hit.
PROSITEiPS51186. GNAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5YAW5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATAAAAAVA APEQPRRRKP APGRGGVALP AGISEEEARV RAIAEIVSAM
60 70 80 90 100
GELSRRGEDV DLNALKSAAC RRYGLARAPK LVEMIAAVPE ADRAALLPRL
110 120 130 140 150
RAKPVRTASG IAVVAVMSKP HRCPHIATTG NICVYCPGGP DSDFEYSTQS
160 170 180 190 200
YTGYEPTSMR AIRARYNPYV QARSRIDQLK RLGHSVDKVE FILMGGTFMS
210 220 230 240 250
LPADYRDYFI RNLHDALSGH TSANVEEAIC YSEHSAVKCI GMTIETRPDY
260 270 280 290 300
CLGPHLRQML SYGCTRLEIG VQSTYEDVAR DTNRGHTVAA VADCFCLAKD
310 320 330 340 350
AGFKVVAHMM PDLPNVGVER DLESFREFFE SPAFRADGLK IYPTLVIRGT
360 370 380 390 400
GLYELWKTGR YRNYPPELLV DIVARILSMV PPWTRVYRVQ RDIPMPLVTS
410 420 430 440 450
GVEKGNLREL ALARMEDLGL KCRDVRTREA GIQDIHHKIR PDEVELVRRD
460 470 480 490 500
YAANEGWETF LSYEDTRQDI LIGLLRLRKC GRNVTCPELV GRCSIVRELH
510 520 530 540 550
VYGTAVPVHG RDVDKLQHQG YGTLLMEEAE RIAQKEHRSK KLAVISGVGT
560 570
RHYYRKLGYE LEGPYMVKTL A
Length:571
Mass (Da):63,730
Last modified:September 1, 2009 - v1
Checksum:iF47E75BA5414D7D7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000765 Genomic DNA. Translation: EES12405.1.
RefSeqiXP_002448077.1. XM_002448032.1.
UniGeneiSbi.7389.

Genome annotation databases

EnsemblPlantsiSb06g020610.1; Sb06g020610.1; Sb06g020610.
GeneIDi8073682.
KEGGisbi:SORBI_06g020610.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000765 Genomic DNA. Translation: EES12405.1.
RefSeqiXP_002448077.1. XM_002448032.1.
UniGeneiSbi.7389.

3D structure databases

ProteinModelPortaliC5YAW5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4558.Sb06g020610.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiSb06g020610.1; Sb06g020610.1; Sb06g020610.
GeneIDi8073682.
KEGGisbi:SORBI_06g020610.

Organism-specific databases

GrameneiC5YAW5.

Phylogenomic databases

eggNOGiCOG1243.
HOGENOMiHOG000227514.
InParanoidiC5YAW5.
KOiK07739.
OMAiGYKVVSH.

Family and domain databases

Gene3Di3.40.630.30. 1 hit.
3.80.30.20. 1 hit.
InterProiIPR016181. Acyl_CoA_acyltransferase.
IPR006638. Elp3/MiaB/NifB.
IPR000182. GNAT_dom.
IPR005910. Hist_AcTrfase_ELP3.
IPR007197. rSAM.
IPR023404. rSAM_horseshoe.
[Graphical view]
PfamiPF00583. Acetyltransf_1. 1 hit.
PF04055. Radical_SAM. 1 hit.
[Graphical view]
PIRSFiPIRSF005669. Hist_AcTrfase_ELP3. 1 hit.
SMARTiSM00729. Elp3. 1 hit.
[Graphical view]
SUPFAMiSSF55729. SSF55729. 1 hit.
TIGRFAMsiTIGR01211. ELP3. 1 hit.
PROSITEiPS51186. GNAT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. BTx623Imported.

Entry informationi

Entry nameiC5YAW5_SORBI
AccessioniPrimary (citable) accession number: C5YAW5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: January 7, 2015
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.