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C5YAW5

- C5YAW5_SORBI

UniProt

C5YAW5 - C5YAW5_SORBI

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Protein
Submitted name: Putative uncharacterized protein Sb06g020610
Gene
Sb06g020610, SORBIDRAFT_06g020610
Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. N-acetyltransferase activity Source: InterPro
  2. iron-sulfur cluster binding Source: InterPro

GO - Biological processi

  1. DNA mediated transformation Source: EnsemblPlants/Gramene
  2. cell proliferation Source: EnsemblPlants/Gramene
  3. organ growth Source: EnsemblPlants/Gramene
  4. regulation of auxin mediated signaling pathway Source: EnsemblPlants/Gramene
  5. regulation of leaf formation Source: EnsemblPlants/Gramene
  6. specification of organ axis polarity Source: EnsemblPlants/Gramene
  7. tRNA wobble uridine modification Source: EnsemblPlants/Gramene
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein Sb06g020610Imported
Gene namesi
Name:Sb06g020610Imported
ORF Names:SORBIDRAFT_06g020610Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
ProteomesiUP000000768: Chromosome 6

Organism-specific databases

GrameneiC5YAW5.

Subcellular locationi

GO - Cellular componenti

  1. Elongator holoenzyme complex Source: EnsemblPlants/Gramene
  2. cytosol Source: EnsemblPlants/Gramene
  3. nuclear euchromatin Source: EnsemblPlants/Gramene
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb06g020610.1.

Structurei

3D structure databases

ProteinModelPortaliC5YAW5.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1243.
HOGENOMiHOG000227514.
KOiK07739.
OMAiGYKVVSH.

Family and domain databases

Gene3Di3.40.630.30. 1 hit.
3.80.30.20. 1 hit.
InterProiIPR016181. Acyl_CoA_acyltransferase.
IPR006638. Elp3/MiaB/NifB.
IPR000182. GNAT_dom.
IPR005910. Hist_AcTrfase_ELP3.
IPR007197. rSAM.
IPR023404. rSAM_horseshoe.
[Graphical view]
PfamiPF00583. Acetyltransf_1. 1 hit.
PF04055. Radical_SAM. 1 hit.
[Graphical view]
PIRSFiPIRSF005669. Hist_AcTrfase_ELP3. 1 hit.
SMARTiSM00729. Elp3. 1 hit.
[Graphical view]
SUPFAMiSSF55729. SSF55729. 1 hit.
TIGRFAMsiTIGR01211. ELP3. 1 hit.
PROSITEiPS51186. GNAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5YAW5-1 [UniParc]FASTAAdd to Basket

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MATAAAAAVA APEQPRRRKP APGRGGVALP AGISEEEARV RAIAEIVSAM    50
GELSRRGEDV DLNALKSAAC RRYGLARAPK LVEMIAAVPE ADRAALLPRL 100
RAKPVRTASG IAVVAVMSKP HRCPHIATTG NICVYCPGGP DSDFEYSTQS 150
YTGYEPTSMR AIRARYNPYV QARSRIDQLK RLGHSVDKVE FILMGGTFMS 200
LPADYRDYFI RNLHDALSGH TSANVEEAIC YSEHSAVKCI GMTIETRPDY 250
CLGPHLRQML SYGCTRLEIG VQSTYEDVAR DTNRGHTVAA VADCFCLAKD 300
AGFKVVAHMM PDLPNVGVER DLESFREFFE SPAFRADGLK IYPTLVIRGT 350
GLYELWKTGR YRNYPPELLV DIVARILSMV PPWTRVYRVQ RDIPMPLVTS 400
GVEKGNLREL ALARMEDLGL KCRDVRTREA GIQDIHHKIR PDEVELVRRD 450
YAANEGWETF LSYEDTRQDI LIGLLRLRKC GRNVTCPELV GRCSIVRELH 500
VYGTAVPVHG RDVDKLQHQG YGTLLMEEAE RIAQKEHRSK KLAVISGVGT 550
RHYYRKLGYE LEGPYMVKTL A 571
Length:571
Mass (Da):63,730
Last modified:September 1, 2009 - v1
Checksum:iF47E75BA5414D7D7
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000765 Genomic DNA. Translation: EES12405.1.
RefSeqiXP_002448077.1. XM_002448032.1.
UniGeneiSbi.7389.

Genome annotation databases

EnsemblPlantsiSb06g020610.1; Sb06g020610.1; Sb06g020610.
GeneIDi8073682.
KEGGisbi:SORBI_06g020610.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000765 Genomic DNA. Translation: EES12405.1 .
RefSeqi XP_002448077.1. XM_002448032.1.
UniGenei Sbi.7389.

3D structure databases

ProteinModelPortali C5YAW5.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 4558.Sb06g020610.1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi Sb06g020610.1 ; Sb06g020610.1 ; Sb06g020610 .
GeneIDi 8073682.
KEGGi sbi:SORBI_06g020610.

Organism-specific databases

Gramenei C5YAW5.

Phylogenomic databases

eggNOGi COG1243.
HOGENOMi HOG000227514.
KOi K07739.
OMAi GYKVVSH.

Family and domain databases

Gene3Di 3.40.630.30. 1 hit.
3.80.30.20. 1 hit.
InterProi IPR016181. Acyl_CoA_acyltransferase.
IPR006638. Elp3/MiaB/NifB.
IPR000182. GNAT_dom.
IPR005910. Hist_AcTrfase_ELP3.
IPR007197. rSAM.
IPR023404. rSAM_horseshoe.
[Graphical view ]
Pfami PF00583. Acetyltransf_1. 1 hit.
PF04055. Radical_SAM. 1 hit.
[Graphical view ]
PIRSFi PIRSF005669. Hist_AcTrfase_ELP3. 1 hit.
SMARTi SM00729. Elp3. 1 hit.
[Graphical view ]
SUPFAMi SSF55729. SSF55729. 1 hit.
TIGRFAMsi TIGR01211. ELP3. 1 hit.
PROSITEi PS51186. GNAT. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. BTx623.

Entry informationi

Entry nameiC5YAW5_SORBI
AccessioniPrimary (citable) accession number: C5YAW5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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