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C5YAW5

- C5YAW5_SORBI

UniProt

C5YAW5 - C5YAW5_SORBI

Protein
Submitted name:

Putative uncharacterized protein Sb06g020610

Gene

Sb06g020610

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi
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    • History
      Entry version 35 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. iron-sulfur cluster binding Source: InterPro
    2. N-acetyltransferase activity Source: InterPro

    GO - Biological processi

    1. cell proliferation Source: EnsemblPlants/Gramene
    2. DNA mediated transformation Source: EnsemblPlants/Gramene
    3. organ growth Source: EnsemblPlants/Gramene
    4. regulation of auxin mediated signaling pathway Source: EnsemblPlants/Gramene
    5. regulation of leaf formation Source: EnsemblPlants/Gramene
    6. specification of organ axis polarity Source: EnsemblPlants/Gramene
    7. tRNA wobble uridine modification Source: EnsemblPlants/Gramene

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized protein Sb06g020610Imported
    Gene namesi
    Name:Sb06g020610Imported
    ORF Names:SORBIDRAFT_06g020610Imported
    OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
    Taxonomic identifieri4558 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
    ProteomesiUP000000768: Chromosome 6

    Organism-specific databases

    GrameneiC5YAW5.

    Subcellular locationi

    GO - Cellular componenti

    1. cytosol Source: EnsemblPlants/Gramene
    2. Elongator holoenzyme complex Source: EnsemblPlants/Gramene
    3. nuclear euchromatin Source: EnsemblPlants/Gramene

    Interactioni

    Protein-protein interaction databases

    STRINGi4558.Sb06g020610.1.

    Structurei

    3D structure databases

    ProteinModelPortaliC5YAW5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1243.
    HOGENOMiHOG000227514.
    KOiK07739.
    OMAiGYKVVSH.

    Family and domain databases

    Gene3Di3.40.630.30. 1 hit.
    3.80.30.20. 1 hit.
    InterProiIPR016181. Acyl_CoA_acyltransferase.
    IPR006638. Elp3/MiaB/NifB.
    IPR000182. GNAT_dom.
    IPR005910. Hist_AcTrfase_ELP3.
    IPR007197. rSAM.
    IPR023404. rSAM_horseshoe.
    [Graphical view]
    PfamiPF00583. Acetyltransf_1. 1 hit.
    PF04055. Radical_SAM. 1 hit.
    [Graphical view]
    PIRSFiPIRSF005669. Hist_AcTrfase_ELP3. 1 hit.
    SMARTiSM00729. Elp3. 1 hit.
    [Graphical view]
    SUPFAMiSSF55729. SSF55729. 1 hit.
    TIGRFAMsiTIGR01211. ELP3. 1 hit.
    PROSITEiPS51186. GNAT. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C5YAW5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MATAAAAAVA APEQPRRRKP APGRGGVALP AGISEEEARV RAIAEIVSAM    50
    GELSRRGEDV DLNALKSAAC RRYGLARAPK LVEMIAAVPE ADRAALLPRL 100
    RAKPVRTASG IAVVAVMSKP HRCPHIATTG NICVYCPGGP DSDFEYSTQS 150
    YTGYEPTSMR AIRARYNPYV QARSRIDQLK RLGHSVDKVE FILMGGTFMS 200
    LPADYRDYFI RNLHDALSGH TSANVEEAIC YSEHSAVKCI GMTIETRPDY 250
    CLGPHLRQML SYGCTRLEIG VQSTYEDVAR DTNRGHTVAA VADCFCLAKD 300
    AGFKVVAHMM PDLPNVGVER DLESFREFFE SPAFRADGLK IYPTLVIRGT 350
    GLYELWKTGR YRNYPPELLV DIVARILSMV PPWTRVYRVQ RDIPMPLVTS 400
    GVEKGNLREL ALARMEDLGL KCRDVRTREA GIQDIHHKIR PDEVELVRRD 450
    YAANEGWETF LSYEDTRQDI LIGLLRLRKC GRNVTCPELV GRCSIVRELH 500
    VYGTAVPVHG RDVDKLQHQG YGTLLMEEAE RIAQKEHRSK KLAVISGVGT 550
    RHYYRKLGYE LEGPYMVKTL A 571
    Length:571
    Mass (Da):63,730
    Last modified:September 1, 2009 - v1
    Checksum:iF47E75BA5414D7D7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000765 Genomic DNA. Translation: EES12405.1.
    RefSeqiXP_002448077.1. XM_002448032.1.
    UniGeneiSbi.7389.

    Genome annotation databases

    EnsemblPlantsiSb06g020610.1; Sb06g020610.1; Sb06g020610.
    GeneIDi8073682.
    KEGGisbi:SORBI_06g020610.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000765 Genomic DNA. Translation: EES12405.1 .
    RefSeqi XP_002448077.1. XM_002448032.1.
    UniGenei Sbi.7389.

    3D structure databases

    ProteinModelPortali C5YAW5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 4558.Sb06g020610.1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi Sb06g020610.1 ; Sb06g020610.1 ; Sb06g020610 .
    GeneIDi 8073682.
    KEGGi sbi:SORBI_06g020610.

    Organism-specific databases

    Gramenei C5YAW5.

    Phylogenomic databases

    eggNOGi COG1243.
    HOGENOMi HOG000227514.
    KOi K07739.
    OMAi GYKVVSH.

    Family and domain databases

    Gene3Di 3.40.630.30. 1 hit.
    3.80.30.20. 1 hit.
    InterProi IPR016181. Acyl_CoA_acyltransferase.
    IPR006638. Elp3/MiaB/NifB.
    IPR000182. GNAT_dom.
    IPR005910. Hist_AcTrfase_ELP3.
    IPR007197. rSAM.
    IPR023404. rSAM_horseshoe.
    [Graphical view ]
    Pfami PF00583. Acetyltransf_1. 1 hit.
    PF04055. Radical_SAM. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF005669. Hist_AcTrfase_ELP3. 1 hit.
    SMARTi SM00729. Elp3. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55729. SSF55729. 1 hit.
    TIGRFAMsi TIGR01211. ELP3. 1 hit.
    PROSITEi PS51186. GNAT. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. BTx623Imported.

    Entry informationi

    Entry nameiC5YAW5_SORBI
    AccessioniPrimary (citable) accession number: C5YAW5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 35 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3