C5YAQ9 (C5YAQ9_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb06g020110 EMBL EES12371.1

Gene names

Name:	Sb06g020110 EMBL EES12371.1
ORF Names:	SORBIDRAFT_06g020110 EMBL EES12371.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare)

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	388 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	protein N-linked glycosylation Inferred from electronic annotation. Source: InterPro
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Molecular function	beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5YAQ9 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: 2D9C20B8C0F86E2A	FASTA	388	45,299
	10 20 30 40 50 60 MPEAGHYGYK KTDGICDGVC GEPVSKAALT MSRLKCALRG FDLRALMVLL IGVPILILMI 70 80 90 100 110 120 YAHGQKVTYF LRPIWESPPK PFKTIPHYYH ENVTMENLCK LHGWKVRDIP RRVFDAVLFS 130 140 150 160 170 180 NELDILEIRW NELSPYVSEF VLLESNSTFT GIKKPLHFKE NEHRFGFVKS RLSYGSIGGR 190 200 210 220 230 240 FVKGENPFVE ESYQRVALDQ LLKLARIEDD DLLIMSDVDE IPSGHTIDLL RWCDDIPDIL 250 260 270 280 290 300 HLQLRNYLYS FEFFLDDKSW RASIHKYKSG KTRYAHFRQT DELLADSGWH CSFCFRYISD 310 320 330 340 350 360 FAFKMQAYSH VDRIRFKYFL NPERIQDVIC RGADLFDMLP EEYTFQEIIA KLGPIPSTYS 370 380 GVHLPSYLLK NVERFRYLLP GNCRRESG

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed: 19189423] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000765 Genomic DNA. Translation: EES12371.1.
RefSeq	XP_002448043.1. XM_002447998.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb06g020110.1; Sb06g020110.1; Sb06g020110.
GeneID	8058717.
KEGG	sbi:SORBI_06g020110.
Phylogenomic databases
GeneTree	EPGT00050000017473.
OMA	NPKRIQD.
PhylomeDB	C5YAQ9.
ProtClustDB	CLSN2682029.
Family and domain databases
InterPro	IPR006813. Glyco_trans_17. [Graphical view]
KO	K00737.
PANTHER	PTHR12224. Glyco_trans_17. 1 hit.
Pfam	PF04724. Glyco_transf_17. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5YAQ9_SORBI

Accession

Primary (citable) accession number: C5YAQ9

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	December 14, 2011
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)