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C5Y9A8 (C5Y9A8_SORBI) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Sb06g018130 EMBL EES10890.1
ORF Names:SORBIDRAFT_06g018130 EMBL EES10890.1
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare) [Reference proteome]
Taxonomic identifier4558 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum

Protein attributes

Sequence length508 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000382
   Molecular functionLyase RuleBase RU000382
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processglutamate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentplasmodesma

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Molecular_functionglutamate decarboxylase activity

Inferred from electronic annotation. Source: InterPro

pyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C5Y9A8 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 60802CBF8B3A10FE

FASTA50856,607
        10         20         30         40         50         60 
MVLTHVHDLD DAAAASAVVF ASRYVQDPLP RYELGEKSIS KDAAYQIIHD ELLLDSSPRL 

        70         80         90        100        110        120 
NLASFVTTWM EPECDRLILE GINKNYADMD EYPVTTELQN RCVNIIARLF HAPAVGASSD 

       130        140        150        160        170        180 
GKAVGVGTVG SSEAIMLAGL AFKRRWQNRR KAAGKPYDKP NIVTGANVQV CWEKFARYFE 

       190        200        210        220        230        240 
VELKEVKLRE GCYVMDPDEA VRMVDENTIC VAAILGSTLT GEFEDVKMLN DLLAAKNAET 

       250        260        270        280        290        300 
GWDTPIHVDA ASGGFIAPFL YPELEWDFRL PLVKSINVSG HKYGLVYAGV GWVIWRSKED 

       310        320        330        340        350        360 
LPEDLIFHIN YLGADQPTFT LNFSKGSSQI IAQYYQFLRL GFEGYRNVME NCMESAQTLR 

       370        380        390        400        410        420 
EGLEQMGRFT IISKEQGVPL VAFTFKSKDE TSLAFKLSSE LRRYGWIVPA YTMPANLEHM 

       430        440        450        460        470        480 
AVLRVVVWED FGRPLAERFL SHVRMALEEL DHAAKGGPVP RMRVTIELGP PDRGSGEEAS 

       490        500 
ARVVKREAVV VPVHRSVSLS GGKTKGVC 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000765 Genomic DNA. Translation: EES10890.1.
RefSeqXP_002446562.1. XM_002446517.1.

3D structure databases

ProteinModelPortalC5Y9A8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING4558.Sb06g018130.1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsSb06g018130.1; Sb06g018130.1; Sb06g018130.
GeneID8073378.
KEGGsbi:SORBI_06g018130.

Organism-specific databases

GrameneC5Y9A8.

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000070228.
KOK01580.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC5Y9A8_SORBI
AccessionPrimary (citable) accession number: C5Y9A8
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)