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C5Y9A8

- C5Y9A8_SORBI

UniProt

C5Y9A8 - C5Y9A8_SORBI

Protein

Glutamate decarboxylase

Gene

Sb06g018130

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 28 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Name:Sb06g018130Imported
    ORF Names:SORBIDRAFT_06g018130Imported
    OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
    Taxonomic identifieri4558 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
    ProteomesiUP000000768: Chromosome 6

    Organism-specific databases

    GrameneiC5Y9A8.

    Subcellular locationi

    GO - Cellular componenti

    1. plasmodesma Source: EnsemblPlants/Gramene

    Interactioni

    Protein-protein interaction databases

    STRINGi4558.Sb06g018130.1.

    Structurei

    3D structure databases

    ProteinModelPortaliC5Y9A8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0076.
    HOGENOMiHOG000070228.
    KOiK01580.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C5Y9A8-1 [UniParc]FASTAAdd to Basket

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    MVLTHVHDLD DAAAASAVVF ASRYVQDPLP RYELGEKSIS KDAAYQIIHD    50
    ELLLDSSPRL NLASFVTTWM EPECDRLILE GINKNYADMD EYPVTTELQN 100
    RCVNIIARLF HAPAVGASSD GKAVGVGTVG SSEAIMLAGL AFKRRWQNRR 150
    KAAGKPYDKP NIVTGANVQV CWEKFARYFE VELKEVKLRE GCYVMDPDEA 200
    VRMVDENTIC VAAILGSTLT GEFEDVKMLN DLLAAKNAET GWDTPIHVDA 250
    ASGGFIAPFL YPELEWDFRL PLVKSINVSG HKYGLVYAGV GWVIWRSKED 300
    LPEDLIFHIN YLGADQPTFT LNFSKGSSQI IAQYYQFLRL GFEGYRNVME 350
    NCMESAQTLR EGLEQMGRFT IISKEQGVPL VAFTFKSKDE TSLAFKLSSE 400
    LRRYGWIVPA YTMPANLEHM AVLRVVVWED FGRPLAERFL SHVRMALEEL 450
    DHAAKGGPVP RMRVTIELGP PDRGSGEEAS ARVVKREAVV VPVHRSVSLS 500
    GGKTKGVC 508
    Length:508
    Mass (Da):56,607
    Last modified:September 1, 2009 - v1
    Checksum:i60802CBF8B3A10FE
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000765 Genomic DNA. Translation: EES10890.1.
    RefSeqiXP_002446562.1. XM_002446517.1.

    Genome annotation databases

    EnsemblPlantsiSb06g018130.1; Sb06g018130.1; Sb06g018130.
    GeneIDi8073378.
    KEGGisbi:SORBI_06g018130.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000765 Genomic DNA. Translation: EES10890.1 .
    RefSeqi XP_002446562.1. XM_002446517.1.

    3D structure databases

    ProteinModelPortali C5Y9A8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 4558.Sb06g018130.1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi Sb06g018130.1 ; Sb06g018130.1 ; Sb06g018130 .
    GeneIDi 8073378.
    KEGGi sbi:SORBI_06g018130.

    Organism-specific databases

    Gramenei C5Y9A8.

    Phylogenomic databases

    eggNOGi COG0076.
    HOGENOMi HOG000070228.
    KOi K01580.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. BTx623Imported.

    Entry informationi

    Entry nameiC5Y9A8_SORBI
    AccessioniPrimary (citable) accession number: C5Y9A8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 28 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3