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C5Y9A0

- C5Y9A0_SORBI

UniProt

C5Y9A0 - C5Y9A0_SORBI

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Protein
Submitted name: Putative uncharacterized protein Sb06g018050
Gene
Sb06g018050, SORBIDRAFT_06g018050
Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate By similarity.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein Sb06g018050Imported
Gene namesi
Name:Sb06g018050Imported
ORF Names:SORBIDRAFT_06g018050Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
ProteomesiUP000000768: Chromosome 6

Organism-specific databases

GrameneiC5Y9A0.

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb06g018050.1.

Structurei

3D structure databases

ProteinModelPortaliC5Y9A0.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
KOiK01580.
OMAiNCRDNAT.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

C5Y9A0-1 [UniParc]FASTAAdd to Basket

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MALSTANTNA AESHLHCSTF ASRYVRTALP RFKMPEQSIP KEAAYQIIND    50
ELMLDGNPRL NLASFVTTWM EPECDKLIQS SINKNYVDMD EYPVTTELQN 100
RCVNMIAHLF NAPIGDDETA VGVGTVGSSE AIMLAGLAFK RKWQNKMKAA 150
GKPYDKPNIV TGANVQVCWE KFARYFEVEL KEVKLREGYY VMDPEKAAEM 200
VDENTICVAA ILGSTLNGEF EDVKMLNDLL AAKNAETGWD TPIHVDAASG 250
GFIAPFIYPE LEWDFRLPLV KSINVSGHKY GLVYAGVGWV IWRSKDDLPD 300
ELIFHINYLG ADQPTFTLNF SKGSSQIIAQ YYQLIRLGFE GYKDVMQNCR 350
DNATVLREGI EKMGYFDVVS KDSGVPLVAF SLKDSSKYTV FEVAESLRRF 400
GWIVPAYTMP ADAEHVAVMR VVIREDFSRG LAERLIADLG KTMADMDAHA 450
GKKAPDHPKK SVHDIEKEVT TFWRRLVANN KKKSSMVC 488
Length:488
Mass (Da):54,742
Last modified:September 1, 2009 - v1
Checksum:i1AE4A3CA8F7209EB
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000765 Genomic DNA. Translation: EES12248.1.
RefSeqiXP_002447920.1. XM_002447875.1.
UniGeneiSbi.5699.

Genome annotation databases

EnsemblPlantsiSb06g018050.1; Sb06g018050.1; Sb06g018050.
GeneIDi8065836.
KEGGisbi:SORBI_06g018050.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000765 Genomic DNA. Translation: EES12248.1 .
RefSeqi XP_002447920.1. XM_002447875.1.
UniGenei Sbi.5699.

3D structure databases

ProteinModelPortali C5Y9A0.
ModBasei Search...

Protein-protein interaction databases

STRINGi 4558.Sb06g018050.1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi Sb06g018050.1 ; Sb06g018050.1 ; Sb06g018050 .
GeneIDi 8065836.
KEGGi sbi:SORBI_06g018050.

Organism-specific databases

Gramenei C5Y9A0.

Phylogenomic databases

eggNOGi COG0076.
HOGENOMi HOG000070228.
KOi K01580.
OMAi NCRDNAT.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. BTx623.

Entry informationi

Entry nameiC5Y9A0_SORBI
AccessioniPrimary (citable) accession number: C5Y9A0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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