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C5Y9A0 (C5Y9A0_SORBI) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Sb06g018050 EMBL EES12248.1
ORF Names:SORBIDRAFT_06g018050 EMBL EES12248.1
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare) [Reference proteome]
Taxonomic identifier4558 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum

Protein attributes

Sequence length488 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
C5Y9A0 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 1AE4A3CA8F7209EB

FASTA48854,742
        10         20         30         40         50         60 
MALSTANTNA AESHLHCSTF ASRYVRTALP RFKMPEQSIP KEAAYQIIND ELMLDGNPRL 

        70         80         90        100        110        120 
NLASFVTTWM EPECDKLIQS SINKNYVDMD EYPVTTELQN RCVNMIAHLF NAPIGDDETA 

       130        140        150        160        170        180 
VGVGTVGSSE AIMLAGLAFK RKWQNKMKAA GKPYDKPNIV TGANVQVCWE KFARYFEVEL 

       190        200        210        220        230        240 
KEVKLREGYY VMDPEKAAEM VDENTICVAA ILGSTLNGEF EDVKMLNDLL AAKNAETGWD 

       250        260        270        280        290        300 
TPIHVDAASG GFIAPFIYPE LEWDFRLPLV KSINVSGHKY GLVYAGVGWV IWRSKDDLPD 

       310        320        330        340        350        360 
ELIFHINYLG ADQPTFTLNF SKGSSQIIAQ YYQLIRLGFE GYKDVMQNCR DNATVLREGI 

       370        380        390        400        410        420 
EKMGYFDVVS KDSGVPLVAF SLKDSSKYTV FEVAESLRRF GWIVPAYTMP ADAEHVAVMR 

       430        440        450        460        470        480 
VVIREDFSRG LAERLIADLG KTMADMDAHA GKKAPDHPKK SVHDIEKEVT TFWRRLVANN 


KKKSSMVC 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000765 Genomic DNA. Translation: EES12248.1.
RefSeqXP_002447920.1. XM_002447875.1.
UniGeneSbi.5699.

3D structure databases

ProteinModelPortalC5Y9A0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING4558.Sb06g018050.1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsSb06g018050.1; Sb06g018050.1; Sb06g018050.
GeneID8065836.
KEGGsbi:SORBI_06g018050.

Organism-specific databases

GrameneC5Y9A0.

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000070228.
KOK01580.
OMAIADLWNA.
ProtClustDBCLSN2683665.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC5Y9A0_SORBI
AccessionPrimary (citable) accession number: C5Y9A0
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: March 19, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)