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C5Y6R9

- C5Y6R9_SORBI

UniProt

C5Y6R9 - C5Y6R9_SORBI

Protein

Protein translocase subunit SecA

Gene

Sb05g005960

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 41 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW

    GO - Biological processi

    1. protein import Source: InterPro
    2. protein targeting Source: InterPro

    Keywords - Biological processi

    Protein transport, TranslocationUniRule annotation, Transport

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein translocase subunit SecAUniRule annotation
    Gene namesi
    Name:Sb05g005960Imported
    Synonyms:secAImported, secA2Imported
    ORF Names:SORBIDRAFT_05g005960Imported
    OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
    Taxonomic identifieri4558 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
    ProteomesiUP000000768: Chromosome 5

    Organism-specific databases

    GrameneiC5Y6R9.

    Subcellular locationi

    GO - Cellular componenti

    1. membrane Source: InterPro

    Interactioni

    Protein-protein interaction databases

    STRINGi4558.Sb05g005960.1.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the SecA family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0653.
    HOGENOMiHOG000218168.
    KOiK03070.
    OMAiRKLGMRH.

    Family and domain databases

    Gene3Di1.10.3060.10. 2 hits.
    3.40.50.300. 4 hits.
    3.90.1440.10. 1 hit.
    HAMAPiMF_01382. SecA.
    InterProiIPR027417. P-loop_NTPase.
    IPR000185. SecA.
    IPR020937. SecA_CS.
    IPR011115. SecA_DEAD.
    IPR014018. SecA_motor_DEAD.
    IPR011130. SecA_preprotein_X-link_dom.
    IPR011116. SecA_Wing/Scaffold.
    [Graphical view]
    PfamiPF07517. SecA_DEAD. 1 hit.
    PF01043. SecA_PP_bind. 1 hit.
    PF07516. SecA_SW. 1 hit.
    [Graphical view]
    PRINTSiPR00906. SECA.
    SMARTiSM00957. SecA_DEAD. 1 hit.
    SM00958. SecA_PP_bind. 1 hit.
    [Graphical view]
    SUPFAMiSSF52540. SSF52540. 4 hits.
    SSF81767. SSF81767. 1 hit.
    SSF81886. SSF81886. 2 hits.
    PROSITEiPS01312. SECA. 1 hit.
    PS51196. SECA_MOTOR_DEAD. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C5Y6R9-1 [UniParc]FASTAAdd to Basket

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    MAAASAGGSL STASASLVPT PTSAPAPRLL SRRSTKPTTR ASPTPRPKKP     50
    PPLSCAAAAT PTPAPAVASK SAGSWRDLCS LNAWVVRDYR RLVDSVGALE 100
    PALRRLSDEQ LKAKTAEFRS RLTRGETLAD VQAEAFAVVR EAARRTLGMR 150
    HFDVQIIGGA VLNDGCIAEM KTGEGKTLVS TLAAYLNALT GEGVHVVTVN 200
    DYLAQRDAEW MGRVHRFLGL TVGLVQAGMK SDERRASYRC DITYTNNSVR 250
    GTTFSGDNLF SKAAHPMQEL GFDYLRDNLS RNKEQLVMRW PKPFHFAIVD 300
    EVDSVLIDEG RNPLLISGED NRDAARYPIA AKVAELLVEG VHYTVELKGN 350
    NIDLTEDGVA HAEIILGTDD LWDENDPWAR FVMNALKAKV FYRRDVQYIV 400
    RDGKAIIINE LTGRVEPKRR WSDGIHQAVE AKEGLKIQAD SVIVAQITYQ 450
    SLFKLYPKLS GMTGTAKTEE KEFLKMFKMP VIEVPTNLPN IRVDLPIQAF 500
    ATARGKWQYV RAEVESMFQL GRPVLVGTTS VESSEYLSEL LKLRNIPHNV 550
    LNARPKYAAR EAEIIAQAGR KHAITISTNM AGRGTDIILG GNPKKYGPSF 600
    CCQMLAKEIV EDNILPFLSH EPPDIDMEGE STSHKGLSNI ELGPSSVGLL 650
    AKAAIMSKYI HKSEINEWSF SKAKSTIAES IEMGQMIGME KLQEHMTEES 700
    EMYPLCDAIG LAYLSVLRDC EIHCSAEGAA VKRLGGLHVV GTSLHESRRI 750
    DNQLCGRAGR QGDPGSTRFM VSLQDEIFQK FNLDTEWAVR LISRITNDED 800
    IAIESNVVVK QLLGLQINAE KYYFGIRKSL VEFDEVLEVQ RKHVYNLRQV 850
    ILSGDSESCS EQIFQYMQAV ADEIVLLNID PQKPPKAWNL VKLLDEFVRL 900
    GGKLLSESFE DIQEENLQSA LEEMQGWDPV KADSFALPNM PVPPDSLRGI 950
    RKKTSSIMRW FAICVDDTSK KGRYTNTVNL LRKYFGDFLI ATYLNAVQES 1000
    RYDDGYISGI EREVLLKTLD TLWKDHLVNM NKLSSAVNVR SFGHRNPLEE 1050
    YKIDGCRFFI SMLSATRRLT VESLLHYWSS PMESEEIFNT EDQ 1093
    Length:1,093
    Mass (Da):121,939
    Last modified:September 1, 2009 - v1
    Checksum:iEA63A6CB5DE367D3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000764 Genomic DNA. Translation: EES08156.1.
    RefSeqiXP_002449168.1. XM_002449123.1.

    Genome annotation databases

    EnsemblPlantsiSb05g005960.1; Sb05g005960.1; Sb05g005960.
    GeneIDi8074328.
    KEGGisbi:SORBI_05g005960.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000764 Genomic DNA. Translation: EES08156.1 .
    RefSeqi XP_002449168.1. XM_002449123.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 4558.Sb05g005960.1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi Sb05g005960.1 ; Sb05g005960.1 ; Sb05g005960 .
    GeneIDi 8074328.
    KEGGi sbi:SORBI_05g005960.

    Organism-specific databases

    Gramenei C5Y6R9.

    Phylogenomic databases

    eggNOGi COG0653.
    HOGENOMi HOG000218168.
    KOi K03070.
    OMAi RKLGMRH.

    Family and domain databases

    Gene3Di 1.10.3060.10. 2 hits.
    3.40.50.300. 4 hits.
    3.90.1440.10. 1 hit.
    HAMAPi MF_01382. SecA.
    InterProi IPR027417. P-loop_NTPase.
    IPR000185. SecA.
    IPR020937. SecA_CS.
    IPR011115. SecA_DEAD.
    IPR014018. SecA_motor_DEAD.
    IPR011130. SecA_preprotein_X-link_dom.
    IPR011116. SecA_Wing/Scaffold.
    [Graphical view ]
    Pfami PF07517. SecA_DEAD. 1 hit.
    PF01043. SecA_PP_bind. 1 hit.
    PF07516. SecA_SW. 1 hit.
    [Graphical view ]
    PRINTSi PR00906. SECA.
    SMARTi SM00957. SecA_DEAD. 1 hit.
    SM00958. SecA_PP_bind. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52540. SSF52540. 4 hits.
    SSF81767. SSF81767. 1 hit.
    SSF81886. SSF81886. 2 hits.
    PROSITEi PS01312. SECA. 1 hit.
    PS51196. SECA_MOTOR_DEAD. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. BTx623Imported.

    Entry informationi

    Entry nameiC5Y6R9_SORBI
    AccessioniPrimary (citable) accession number: C5Y6R9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 41 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3