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Protein
Submitted name:

Uncharacterized protein

Gene

SORBI_005G072400

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:SORBI_005G072400Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeSorghinaeSorghum
Proteomesi
  • UP000000768 Componenti: Chromosome 5

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb05g005960.1.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410IHHM. Eukaryota.
COG0653. LUCA.
HOGENOMiHOG000218168.
InParanoidiC5Y6R9.
KOiK03070.
OMAiTARGKWQ.
OrthoDBiEOG093601R9.

Family and domain databases

Gene3Di2.60.120.330. 3 hits.
InterProiIPR027443. IPNS-like.
IPR005123. Oxoglu/Fe-dep_dioxygenase.
[Graphical view]
PfamiPF03171. 2OG-FeII_Oxy. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5Y6R9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAAATATAL DIAEIPFSDL VVLLSPDTLA DDGRCRRVVD TVATELGRGG
60 70 80 90 100
SGLLAIAGVP RVGALRRRLL PLARRLALMD HPTRSQLLKK HGLGSDVPLK
110 120 130 140 150
KLDRSVSSFA QLLRHSGELT LLESVNNNNG FNYSDKIQDC NQSDEANGDD
160 170 180 190 200
DMENLGDLVE ELGLYMMELG ILVARACDIV IGKGQLEQSI TDFGTAKARL
210 220 230 240 250
IHYHSELDNS IIRDKSTKRK CLVNNVAVKP YQSCSGRRAG SLCLCCIKSE
260 270 280 290 300
DGTTVVSIKG NDSKDASIQG QAAAEISLLN LWQEWHYDYG IFTVLTAPLF
310 320 330 340 350
LSASEDENSL VNLECHPPDG HTHLQLCNGR KLFSVRCSPE SFIVQVGEAA
360 370 380 390 400
DILSQGKLKS TLHAVSRPLS SMDISRETFV VFLQPSWDKT LAYPGYSLDE
410 420 430 440 450
GESILSKETS AISDGSAGPC DEDAFMQGIH KKIPPLSSRL KEGMTFAEFS
460
RQTTKQYYGG SGIQQNN
Length:467
Mass (Da):50,795
Last modified:November 2, 2016 - v2
Checksum:i4D877CFD761E5986
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000764 Genomic DNA. Translation: EES08156.2.
RefSeqiXP_002449168.1. XM_002449123.1.

Genome annotation databases

EnsemblPlantsiSb05g005960.1; Sb05g005960.1; Sb05g005960.
GeneIDi8074328.
GrameneiSb05g005960.1; Sb05g005960.1; Sb05g005960.
KEGGisbi:SORBI_05g005960.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000764 Genomic DNA. Translation: EES08156.2.
RefSeqiXP_002449168.1. XM_002449123.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4558.Sb05g005960.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiSb05g005960.1; Sb05g005960.1; Sb05g005960.
GeneIDi8074328.
GrameneiSb05g005960.1; Sb05g005960.1; Sb05g005960.
KEGGisbi:SORBI_05g005960.

Phylogenomic databases

eggNOGiENOG410IHHM. Eukaryota.
COG0653. LUCA.
HOGENOMiHOG000218168.
InParanoidiC5Y6R9.
KOiK03070.
OMAiTARGKWQ.
OrthoDBiEOG093601R9.

Family and domain databases

Gene3Di2.60.120.330. 3 hits.
InterProiIPR027443. IPNS-like.
IPR005123. Oxoglu/Fe-dep_dioxygenase.
[Graphical view]
PfamiPF03171. 2OG-FeII_Oxy. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiC5Y6R9_SORBI
AccessioniPrimary (citable) accession number: C5Y6R9
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: November 2, 2016
Last modified: November 30, 2016
This is version 54 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.