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C5Y6R9 (C5Y6R9_SORBI) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Protein translocase subunit SecA RuleBase RU003874
Gene names
Name:Sb05g005960 EMBL EES08156.1
Synonyms:secA EMBL EES08156.1, secA2 EMBL EES08156.1
ORF Names:SORBIDRAFT_05g005960 EMBL EES08156.1
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare) [Reference proteome]
Taxonomic identifier4558 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum

Protein attributes

Sequence length1093 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the SecA family. RuleBase RU003874

Ontologies

Sequences

Sequence LengthMass (Da)Tools
C5Y6R9 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: EA63A6CB5DE367D3

FASTA1,093121,939
        10         20         30         40         50         60 
MAAASAGGSL STASASLVPT PTSAPAPRLL SRRSTKPTTR ASPTPRPKKP PPLSCAAAAT 

        70         80         90        100        110        120 
PTPAPAVASK SAGSWRDLCS LNAWVVRDYR RLVDSVGALE PALRRLSDEQ LKAKTAEFRS 

       130        140        150        160        170        180 
RLTRGETLAD VQAEAFAVVR EAARRTLGMR HFDVQIIGGA VLNDGCIAEM KTGEGKTLVS 

       190        200        210        220        230        240 
TLAAYLNALT GEGVHVVTVN DYLAQRDAEW MGRVHRFLGL TVGLVQAGMK SDERRASYRC 

       250        260        270        280        290        300 
DITYTNNSVR GTTFSGDNLF SKAAHPMQEL GFDYLRDNLS RNKEQLVMRW PKPFHFAIVD 

       310        320        330        340        350        360 
EVDSVLIDEG RNPLLISGED NRDAARYPIA AKVAELLVEG VHYTVELKGN NIDLTEDGVA 

       370        380        390        400        410        420 
HAEIILGTDD LWDENDPWAR FVMNALKAKV FYRRDVQYIV RDGKAIIINE LTGRVEPKRR 

       430        440        450        460        470        480 
WSDGIHQAVE AKEGLKIQAD SVIVAQITYQ SLFKLYPKLS GMTGTAKTEE KEFLKMFKMP 

       490        500        510        520        530        540 
VIEVPTNLPN IRVDLPIQAF ATARGKWQYV RAEVESMFQL GRPVLVGTTS VESSEYLSEL 

       550        560        570        580        590        600 
LKLRNIPHNV LNARPKYAAR EAEIIAQAGR KHAITISTNM AGRGTDIILG GNPKKYGPSF 

       610        620        630        640        650        660 
CCQMLAKEIV EDNILPFLSH EPPDIDMEGE STSHKGLSNI ELGPSSVGLL AKAAIMSKYI 

       670        680        690        700        710        720 
HKSEINEWSF SKAKSTIAES IEMGQMIGME KLQEHMTEES EMYPLCDAIG LAYLSVLRDC 

       730        740        750        760        770        780 
EIHCSAEGAA VKRLGGLHVV GTSLHESRRI DNQLCGRAGR QGDPGSTRFM VSLQDEIFQK 

       790        800        810        820        830        840 
FNLDTEWAVR LISRITNDED IAIESNVVVK QLLGLQINAE KYYFGIRKSL VEFDEVLEVQ 

       850        860        870        880        890        900 
RKHVYNLRQV ILSGDSESCS EQIFQYMQAV ADEIVLLNID PQKPPKAWNL VKLLDEFVRL 

       910        920        930        940        950        960 
GGKLLSESFE DIQEENLQSA LEEMQGWDPV KADSFALPNM PVPPDSLRGI RKKTSSIMRW 

       970        980        990       1000       1010       1020 
FAICVDDTSK KGRYTNTVNL LRKYFGDFLI ATYLNAVQES RYDDGYISGI EREVLLKTLD 

      1030       1040       1050       1060       1070       1080 
TLWKDHLVNM NKLSSAVNVR SFGHRNPLEE YKIDGCRFFI SMLSATRRLT VESLLHYWSS 

      1090 
PMESEEIFNT EDQ 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000764 Genomic DNA. Translation: EES08156.1.
RefSeqXP_002449168.1. XM_002449123.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING4558.Sb05g005960.1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsSb05g005960.1; Sb05g005960.1; Sb05g005960.
GeneID8074328.
KEGGsbi:SORBI_05g005960.

Organism-specific databases

GrameneC5Y6R9.

Phylogenomic databases

eggNOGCOG0653.
HOGENOMHOG000218168.
KOK03070.
OMARKLGMRH.

Family and domain databases

Gene3D1.10.3060.10. 2 hits.
3.40.50.300. 4 hits.
3.90.1440.10. 1 hit.
HAMAPMF_01382. SecA.
InterProIPR027417. P-loop_NTPase.
IPR000185. SecA.
IPR020937. SecA_CS.
IPR011115. SecA_DEAD.
IPR014018. SecA_motor_DEAD.
IPR011130. SecA_preprotein_X-link_dom.
IPR011116. SecA_Wing/Scaffold.
[Graphical view]
PfamPF07517. SecA_DEAD. 1 hit.
PF01043. SecA_PP_bind. 1 hit.
PF07516. SecA_SW. 1 hit.
[Graphical view]
PRINTSPR00906. SECA.
SMARTSM00957. SecA_DEAD. 1 hit.
SM00958. SecA_PP_bind. 1 hit.
[Graphical view]
SUPFAMSSF52540. SSF52540. 4 hits.
SSF81767. SSF81767. 1 hit.
SSF81886. SSF81886. 2 hits.
PROSITEPS01312. SECA. 1 hit.
PS51196. SECA_MOTOR_DEAD. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5Y6R9_SORBI
AccessionPrimary (citable) accession number: C5Y6R9
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)