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C5Y6R9

- C5Y6R9_SORBI

UniProt

C5Y6R9 - C5Y6R9_SORBI

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Protein
Protein translocase subunit SecA
Gene
Sb05g005960, secA, secA2, SORBIDRAFT_05g005960
Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW

GO - Biological processi

  1. protein import Source: InterPro
  2. protein targeting Source: InterPro
Complete GO annotation...

Keywords - Biological processi

Protein transport, TranslocationUniRule annotation, Transport

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Protein translocase subunit SecAUniRule annotation
Gene namesi
Name:Sb05g005960Imported
Synonyms:secAImported, secA2Imported
ORF Names:SORBIDRAFT_05g005960Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
ProteomesiUP000000768: Chromosome 5

Organism-specific databases

GrameneiC5Y6R9.

Subcellular locationi

GO - Cellular componenti

  1. membrane Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb05g005960.1.

Family & Domainsi

Sequence similaritiesi

Belongs to the SecA family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0653.
HOGENOMiHOG000218168.
KOiK03070.
OMAiRKLGMRH.

Family and domain databases

Gene3Di1.10.3060.10. 2 hits.
3.40.50.300. 4 hits.
3.90.1440.10. 1 hit.
HAMAPiMF_01382. SecA.
InterProiIPR027417. P-loop_NTPase.
IPR000185. SecA.
IPR020937. SecA_CS.
IPR011115. SecA_DEAD.
IPR014018. SecA_motor_DEAD.
IPR011130. SecA_preprotein_X-link_dom.
IPR011116. SecA_Wing/Scaffold.
[Graphical view]
PfamiPF07517. SecA_DEAD. 1 hit.
PF01043. SecA_PP_bind. 1 hit.
PF07516. SecA_SW. 1 hit.
[Graphical view]
PRINTSiPR00906. SECA.
SMARTiSM00957. SecA_DEAD. 1 hit.
SM00958. SecA_PP_bind. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 4 hits.
SSF81767. SSF81767. 1 hit.
SSF81886. SSF81886. 2 hits.
PROSITEiPS01312. SECA. 1 hit.
PS51196. SECA_MOTOR_DEAD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5Y6R9-1 [UniParc]FASTAAdd to Basket

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MAAASAGGSL STASASLVPT PTSAPAPRLL SRRSTKPTTR ASPTPRPKKP     50
PPLSCAAAAT PTPAPAVASK SAGSWRDLCS LNAWVVRDYR RLVDSVGALE 100
PALRRLSDEQ LKAKTAEFRS RLTRGETLAD VQAEAFAVVR EAARRTLGMR 150
HFDVQIIGGA VLNDGCIAEM KTGEGKTLVS TLAAYLNALT GEGVHVVTVN 200
DYLAQRDAEW MGRVHRFLGL TVGLVQAGMK SDERRASYRC DITYTNNSVR 250
GTTFSGDNLF SKAAHPMQEL GFDYLRDNLS RNKEQLVMRW PKPFHFAIVD 300
EVDSVLIDEG RNPLLISGED NRDAARYPIA AKVAELLVEG VHYTVELKGN 350
NIDLTEDGVA HAEIILGTDD LWDENDPWAR FVMNALKAKV FYRRDVQYIV 400
RDGKAIIINE LTGRVEPKRR WSDGIHQAVE AKEGLKIQAD SVIVAQITYQ 450
SLFKLYPKLS GMTGTAKTEE KEFLKMFKMP VIEVPTNLPN IRVDLPIQAF 500
ATARGKWQYV RAEVESMFQL GRPVLVGTTS VESSEYLSEL LKLRNIPHNV 550
LNARPKYAAR EAEIIAQAGR KHAITISTNM AGRGTDIILG GNPKKYGPSF 600
CCQMLAKEIV EDNILPFLSH EPPDIDMEGE STSHKGLSNI ELGPSSVGLL 650
AKAAIMSKYI HKSEINEWSF SKAKSTIAES IEMGQMIGME KLQEHMTEES 700
EMYPLCDAIG LAYLSVLRDC EIHCSAEGAA VKRLGGLHVV GTSLHESRRI 750
DNQLCGRAGR QGDPGSTRFM VSLQDEIFQK FNLDTEWAVR LISRITNDED 800
IAIESNVVVK QLLGLQINAE KYYFGIRKSL VEFDEVLEVQ RKHVYNLRQV 850
ILSGDSESCS EQIFQYMQAV ADEIVLLNID PQKPPKAWNL VKLLDEFVRL 900
GGKLLSESFE DIQEENLQSA LEEMQGWDPV KADSFALPNM PVPPDSLRGI 950
RKKTSSIMRW FAICVDDTSK KGRYTNTVNL LRKYFGDFLI ATYLNAVQES 1000
RYDDGYISGI EREVLLKTLD TLWKDHLVNM NKLSSAVNVR SFGHRNPLEE 1050
YKIDGCRFFI SMLSATRRLT VESLLHYWSS PMESEEIFNT EDQ 1093
Length:1,093
Mass (Da):121,939
Last modified:September 1, 2009 - v1
Checksum:iEA63A6CB5DE367D3
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000764 Genomic DNA. Translation: EES08156.1.
RefSeqiXP_002449168.1. XM_002449123.1.

Genome annotation databases

EnsemblPlantsiSb05g005960.1; Sb05g005960.1; Sb05g005960.
GeneIDi8074328.
KEGGisbi:SORBI_05g005960.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000764 Genomic DNA. Translation: EES08156.1 .
RefSeqi XP_002449168.1. XM_002449123.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 4558.Sb05g005960.1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi Sb05g005960.1 ; Sb05g005960.1 ; Sb05g005960 .
GeneIDi 8074328.
KEGGi sbi:SORBI_05g005960.

Organism-specific databases

Gramenei C5Y6R9.

Phylogenomic databases

eggNOGi COG0653.
HOGENOMi HOG000218168.
KOi K03070.
OMAi RKLGMRH.

Family and domain databases

Gene3Di 1.10.3060.10. 2 hits.
3.40.50.300. 4 hits.
3.90.1440.10. 1 hit.
HAMAPi MF_01382. SecA.
InterProi IPR027417. P-loop_NTPase.
IPR000185. SecA.
IPR020937. SecA_CS.
IPR011115. SecA_DEAD.
IPR014018. SecA_motor_DEAD.
IPR011130. SecA_preprotein_X-link_dom.
IPR011116. SecA_Wing/Scaffold.
[Graphical view ]
Pfami PF07517. SecA_DEAD. 1 hit.
PF01043. SecA_PP_bind. 1 hit.
PF07516. SecA_SW. 1 hit.
[Graphical view ]
PRINTSi PR00906. SECA.
SMARTi SM00957. SecA_DEAD. 1 hit.
SM00958. SecA_PP_bind. 1 hit.
[Graphical view ]
SUPFAMi SSF52540. SSF52540. 4 hits.
SSF81767. SSF81767. 1 hit.
SSF81886. SSF81886. 2 hits.
PROSITEi PS01312. SECA. 1 hit.
PS51196. SECA_MOTOR_DEAD. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. BTx623.

Entry informationi

Entry nameiC5Y6R9_SORBI
AccessioniPrimary (citable) accession number: C5Y6R9
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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