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C5Y6R9

- C5Y6R9_SORBI

UniProt

C5Y6R9 - C5Y6R9_SORBI

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Protein

Protein translocase subunit SecA

Gene

Sb05g005960

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW

GO - Biological processi

  1. protein import Source: InterPro
  2. protein targeting Source: InterPro
Complete GO annotation...

Keywords - Biological processi

Protein transport, TranslocationUniRule annotation, Transport

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Protein translocase subunit SecAUniRule annotation
Gene namesi
Name:Sb05g005960Imported
Synonyms:secAImported, secA2Imported
ORF Names:SORBIDRAFT_05g005960Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
ProteomesiUP000000768: Chromosome 5

Organism-specific databases

GrameneiC5Y6R9.

Subcellular locationi

GO - Cellular componenti

  1. membrane Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb05g005960.1.

Family & Domainsi

Sequence similaritiesi

Belongs to the SecA family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0653.
HOGENOMiHOG000218168.
InParanoidiC5Y6R9.
KOiK03070.
OMAiRKLGMRH.

Family and domain databases

Gene3Di1.10.3060.10. 2 hits.
3.40.50.300. 4 hits.
3.90.1440.10. 1 hit.
HAMAPiMF_01382. SecA.
InterProiIPR027417. P-loop_NTPase.
IPR000185. SecA.
IPR020937. SecA_CS.
IPR011115. SecA_DEAD.
IPR014018. SecA_motor_DEAD.
IPR011130. SecA_preprotein_X-link_dom.
IPR011116. SecA_Wing/Scaffold.
[Graphical view]
PfamiPF07517. SecA_DEAD. 1 hit.
PF01043. SecA_PP_bind. 1 hit.
PF07516. SecA_SW. 1 hit.
[Graphical view]
PRINTSiPR00906. SECA.
SMARTiSM00957. SecA_DEAD. 1 hit.
SM00958. SecA_PP_bind. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 4 hits.
SSF81767. SSF81767. 1 hit.
SSF81886. SSF81886. 2 hits.
PROSITEiPS01312. SECA. 1 hit.
PS51196. SECA_MOTOR_DEAD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5Y6R9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAAASAGGSL STASASLVPT PTSAPAPRLL SRRSTKPTTR ASPTPRPKKP
60 70 80 90 100
PPLSCAAAAT PTPAPAVASK SAGSWRDLCS LNAWVVRDYR RLVDSVGALE
110 120 130 140 150
PALRRLSDEQ LKAKTAEFRS RLTRGETLAD VQAEAFAVVR EAARRTLGMR
160 170 180 190 200
HFDVQIIGGA VLNDGCIAEM KTGEGKTLVS TLAAYLNALT GEGVHVVTVN
210 220 230 240 250
DYLAQRDAEW MGRVHRFLGL TVGLVQAGMK SDERRASYRC DITYTNNSVR
260 270 280 290 300
GTTFSGDNLF SKAAHPMQEL GFDYLRDNLS RNKEQLVMRW PKPFHFAIVD
310 320 330 340 350
EVDSVLIDEG RNPLLISGED NRDAARYPIA AKVAELLVEG VHYTVELKGN
360 370 380 390 400
NIDLTEDGVA HAEIILGTDD LWDENDPWAR FVMNALKAKV FYRRDVQYIV
410 420 430 440 450
RDGKAIIINE LTGRVEPKRR WSDGIHQAVE AKEGLKIQAD SVIVAQITYQ
460 470 480 490 500
SLFKLYPKLS GMTGTAKTEE KEFLKMFKMP VIEVPTNLPN IRVDLPIQAF
510 520 530 540 550
ATARGKWQYV RAEVESMFQL GRPVLVGTTS VESSEYLSEL LKLRNIPHNV
560 570 580 590 600
LNARPKYAAR EAEIIAQAGR KHAITISTNM AGRGTDIILG GNPKKYGPSF
610 620 630 640 650
CCQMLAKEIV EDNILPFLSH EPPDIDMEGE STSHKGLSNI ELGPSSVGLL
660 670 680 690 700
AKAAIMSKYI HKSEINEWSF SKAKSTIAES IEMGQMIGME KLQEHMTEES
710 720 730 740 750
EMYPLCDAIG LAYLSVLRDC EIHCSAEGAA VKRLGGLHVV GTSLHESRRI
760 770 780 790 800
DNQLCGRAGR QGDPGSTRFM VSLQDEIFQK FNLDTEWAVR LISRITNDED
810 820 830 840 850
IAIESNVVVK QLLGLQINAE KYYFGIRKSL VEFDEVLEVQ RKHVYNLRQV
860 870 880 890 900
ILSGDSESCS EQIFQYMQAV ADEIVLLNID PQKPPKAWNL VKLLDEFVRL
910 920 930 940 950
GGKLLSESFE DIQEENLQSA LEEMQGWDPV KADSFALPNM PVPPDSLRGI
960 970 980 990 1000
RKKTSSIMRW FAICVDDTSK KGRYTNTVNL LRKYFGDFLI ATYLNAVQES
1010 1020 1030 1040 1050
RYDDGYISGI EREVLLKTLD TLWKDHLVNM NKLSSAVNVR SFGHRNPLEE
1060 1070 1080 1090
YKIDGCRFFI SMLSATRRLT VESLLHYWSS PMESEEIFNT EDQ
Length:1,093
Mass (Da):121,939
Last modified:September 1, 2009 - v1
Checksum:iEA63A6CB5DE367D3
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000764 Genomic DNA. Translation: EES08156.1.
RefSeqiXP_002449168.1. XM_002449123.1.

Genome annotation databases

EnsemblPlantsiSb05g005960.1; Sb05g005960.1; Sb05g005960.
GeneIDi8074328.
KEGGisbi:SORBI_05g005960.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000764 Genomic DNA. Translation: EES08156.1 .
RefSeqi XP_002449168.1. XM_002449123.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 4558.Sb05g005960.1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi Sb05g005960.1 ; Sb05g005960.1 ; Sb05g005960 .
GeneIDi 8074328.
KEGGi sbi:SORBI_05g005960.

Organism-specific databases

Gramenei C5Y6R9.

Phylogenomic databases

eggNOGi COG0653.
HOGENOMi HOG000218168.
InParanoidi C5Y6R9.
KOi K03070.
OMAi RKLGMRH.

Family and domain databases

Gene3Di 1.10.3060.10. 2 hits.
3.40.50.300. 4 hits.
3.90.1440.10. 1 hit.
HAMAPi MF_01382. SecA.
InterProi IPR027417. P-loop_NTPase.
IPR000185. SecA.
IPR020937. SecA_CS.
IPR011115. SecA_DEAD.
IPR014018. SecA_motor_DEAD.
IPR011130. SecA_preprotein_X-link_dom.
IPR011116. SecA_Wing/Scaffold.
[Graphical view ]
Pfami PF07517. SecA_DEAD. 1 hit.
PF01043. SecA_PP_bind. 1 hit.
PF07516. SecA_SW. 1 hit.
[Graphical view ]
PRINTSi PR00906. SECA.
SMARTi SM00957. SecA_DEAD. 1 hit.
SM00958. SecA_PP_bind. 1 hit.
[Graphical view ]
SUPFAMi SSF52540. SSF52540. 4 hits.
SSF81767. SSF81767. 1 hit.
SSF81886. SSF81886. 2 hits.
PROSITEi PS01312. SECA. 1 hit.
PS51196. SECA_MOTOR_DEAD. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. BTx623Imported.

Entry informationi

Entry nameiC5Y6R9_SORBI
AccessioniPrimary (citable) accession number: C5Y6R9
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: October 29, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3