C5XXM0 (C5XXM0_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb04g025885 EMBL EES07145.1

Gene names

Name:	Sb04g025885 EMBL EES07145.1
ORF Names:	SORBIDRAFT_04g025885 EMBL EES07145.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare)

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	338 AA.
Sequence status	Fragment.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	338	1	EMBL EES07145.1

Sequences

	Sequence		Length	Mass (Da)
	C5XXM0 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: DFCDE90934DC844D	FASTA	338	38,745
	10 20 30 40 50 60 MERKFKIWTY KEGEPPLTHL GPSADIYSIE GQFLEEIEDP RNPFAARHPG EAHAFLLPVS 70 80 90 100 110 120 VCNLVQYIYP FYRRNTTAYM AHMRRALADY VDVVAGRYPY WNRSRGADHV MVSCHDWAPL 130 140 150 160 170 180 VSEANGELYA NAIRVLCNAN TSESFRPRKD ATLPEVNLGD GLLRRPTFGM PPENRTTLAF 190 200 210 220 230 240 FAGGMHGHIR KALLGYWLGR KDPDMDIHEY LPKGQDYHAL MASARFCLCP SGFEVASPRV 250 260 270 280 290 300 VESVFSGCVP VIISDGYPPP FSDVLDWSKM SVTVPPARIP ELKDILKGVS ERRYRVLRAR 310 320 330 VLQAQRHFVV HRPSQRFDMI RMVMHSIWLR RLNVRLPY

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed: 19189423] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000763 Genomic DNA. Translation: EES07145.1.
RefSeq	XP_002454169.1. XM_002454124.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb04g025885.1; Sb04g025885.1; Sb04g025885.
GeneID	8072457.
KEGG	sbi:SORBI_04g025885.
Phylogenomic databases
GeneTree	EPGT00070000028243.
OMA	NRTTLAF.
PhylomeDB	C5XXM0.
Family and domain databases
InterPro	IPR004263. Exostosin. [Graphical view]
Pfam	PF03016. Exostosin. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5XXM0_SORBI

Accession

Primary (citable) accession number: C5XXM0

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	December 14, 2011
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)