C5XX72 (C5XX72_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb04g025290 EMBL EES07113.1

Gene names

Name:	Sb04g025290 EMBL EES07113.1
ORF Names:	SORBIDRAFT_04g025290 EMBL EES07113.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare) [Reference proteome]

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › Liliopsida › commelinids › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	746 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	phosphoenolpyruvate-dependent sugar phosphotransferase system Inferred from electronic annotation. Source: EnsemblPlants/Gramene terpenoid biosynthetic process Inferred from electronic annotation. Source: InterPro
Cellular_component	plastid Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Molecular_function	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity Inferred from electronic annotation. Source: InterPro iron ion binding Inferred from electronic annotation. Source: InterPro sugar:hydrogen symporter activity Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5XX72 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: B079F7033C7A340A	FASTA	746	82,121
	10 20 30 40 50 60 MATGVAPASL PHVRVRDGGV GFTRSVDFAK VLSTPSAGTM RTSSSRGRAL VAKSSSTGSE 70 80 90 100 110 120 TVELEPSSEG SPLLVPRQKY CESIHQTRRR KTRTVMVGNV PLGSDHPIRI QTMTTSDTKD 130 140 150 160 170 180 VAKTVEEVMR IADKGADIVR ITVQGRKEAD ACFEIKDTLV QKNYNIPLVA DIHFAPTVAL 190 200 210 220 230 240 RVAECFDKIR VNPGNFADRR AQFEKLEYTD DDYQKELEHI EKVFSPLVEK CKQYGRAMRI 250 260 270 280 290 300 GTNHGSLSDR IMSYYGDSPR GMVESALEFA RICRKLDYHN FVFSMKASNP VVMVQAYRLL 310 320 330 340 350 360 VAEMYNLGWD YPLHLGVTEA GEGEDGRMKS AIGIGTLLMD GLGDTIRVSL TEPPEEEIDP 370 380 390 400 410 420 CQRLANLGAQ AANLQIGVAP FEEKHRRYFD FQRRSGQLPL QKEGEEVDYR NVLHRDGSVL 430 440 450 460 470 480 MSVSLDQLKA PELLYRSLAA KLVVGMPFKD LATVDSILLR ELPPVEDAEA RLALKRLVDI 490 500 510 520 530 540 GMGVLTPLSE QLTKPLPHAI VLVNLDELSS GAHKLLPEGT RLAVTLRGDE SYEQLDILKD 550 560 570 580 590 600 VDDITMLLHN VPYGEEKTGR VHAARRLFEY LQASGLNFPV IHHIDFPKAI DRDGLVIGAG 610 620 630 640 650 660 ANVGALLVDG LGDGVLLEAA DQEFEFLRDT SFNLLQGCRM RNTKTEYVSC PSCGRTLFDL 670 680 690 700 710 720 QEISAEIREK TSHLPGVSIA IMGCIVNGPG EMADADFGYV GGAPGKIDLY VGKTVVQRGI 730 740 AMEGATDALI QLIKDNGRWV DPPAEE

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000763 Genomic DNA. Translation: EES07113.1.
RefSeq	XP_002454137.1. XM_002454092.1.
UniGene	Sbi.2936.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	4558.Sb04g025290.1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb04g025290.1; Sb04g025290.1; Sb04g025290.
GeneID	8072432.
KEGG	sbi:SORBI_04g025290.
Organism-specific databases
Gramene	C5XX72.
Phylogenomic databases
eggNOG	COG0821.
HOGENOM	HOG000261018.
KO	K03526.
OMA	SMRIGTN.
ProtClustDB	PLN02925.
Family and domain databases
HAMAP	MF_00159. IspG.
InterPro	IPR017178. IspG_atypical. IPR004588. IspG_bac-typ. [Graphical view]
Pfam	PF04551. GcpE. 1 hit. [Graphical view]
PIRSF	PIRSF037336. IspG_like. 1 hit.
TIGRFAMs	TIGR00612. ispG_gcpE. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C5XX72_SORBI

Accession

Primary (citable) accession number: C5XX72

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	April 3, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)