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C5XWJ8 (C5XWJ8_SORBI) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Tu RuleBase RU004061
Gene names
Name:Sb04g024850 EMBL EES05366.1
ORF Names:SORBIDRAFT_04g024850 EMBL EES05366.1
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare) [Reference proteome]
Taxonomic identifier4558 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum

Protein attributes

Sequence length466 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325

Sequences

Sequence LengthMass (Da)Tools
C5XWJ8 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: CB3401CB8BF46A9E

FASTA46650,721
        10         20         30         40         50         60 
MASLASASTS LLFPQATSSR SRVRLSTSLG FSAQPARLRS RAAAAGGQRR GRLLVVRAAR 

        70         80         90        100        110        120 
GKFERTKPHV NIGTIGHVDH GKTTLTAALT MVLASVGGSA PKKYDEIDAA PEERARGITI 

       130        140        150        160        170        180 
NTATVEYETE TRHYAHVDCP GHADYVKNMI TGAAQMDGAI LVVSGADGPM PQTKEHILLA 

       190        200        210        220        230        240 
KQVGVPKIVV FLNKKDMVDD EELLELVELE VRELLSNYEY DGDDVPIIAG SALKALEALM 

       250        260        270        280        290        300 
ANPALKRGDN EWVDYIFNLV DEVDNYIPVP QRQTDLPFLL AVEDVFSITG RGTVATGRIE 

       310        320        330        340        350        360 
RGTVKVGDTV DIVGIRDTRT CTVTGVEMFQ KTMDDAMAGD NVGLLLRGMQ KDDIERGMVL 

       370        380        390        400        410        420 
AKPGSITPHT KFEAVVYVLK KEEGGRHSPF FPGYRPQFYM RTTDVTGSVT TIMNDKDEEA 

       430        440        450        460 
KMCMPGDRIK MIVQLIQPVA CEQGMRFAIR EGGKTVGAGV INKIIE 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000763 Genomic DNA. Translation: EES05366.1.
RefSeqXP_002452390.1. XM_002452345.1.

3D structure databases

ProteinModelPortalC5XWJ8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING4558.Sb04g024850.1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsSb04g024850.1; Sb04g024850.1; Sb04g024850.
GeneID8056476.
KEGGsbi:SORBI_04g024850.

Organism-specific databases

GrameneC5XWJ8.

Phylogenomic databases

eggNOGCOG0050.
HOGENOMHOG000229290.
KOK02358.
OMASHIEYST.
ProtClustDBPLN03126.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5XWJ8_SORBI
AccessionPrimary (citable) accession number: C5XWJ8
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: April 16, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)