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C5XWJ8

- C5XWJ8_SORBI

UniProt

C5XWJ8 - C5XWJ8_SORBI

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Protein

Elongation factor Tu

Gene
Sb04g024850, SORBIDRAFT_04g024850
Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity.UniRule annotation

GO - Molecular functioni

  1. GTPase activity Source: InterPro
  2. GTP binding Source: UniProtKB-KW
  3. translation elongation factor activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Elongation factorUniRule annotation

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Gene namesi
Name:Sb04g024850Imported
ORF Names:SORBIDRAFT_04g024850Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
ProteomesiUP000000768: Chromosome 4

Organism-specific databases

GrameneiC5XWJ8.

Subcellular locationi

GO - Cellular componenti

  1. apoplast Source: EnsemblPlants/Gramene
  2. chloroplast envelope Source: EnsemblPlants/Gramene
  3. chloroplast thylakoid membrane Source: EnsemblPlants/Gramene
  4. nucleoid Source: EnsemblPlants/Gramene
  5. nucleolus Source: EnsemblPlants/Gramene
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb04g024850.1.

Structurei

3D structure databases

ProteinModelPortaliC5XWJ8.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0050.
HOGENOMiHOG000229290.
KOiK02358.
OMAiTTIMNDK.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5XWJ8-1 [UniParc]FASTAAdd to Basket

« Hide

MASLASASTS LLFPQATSSR SRVRLSTSLG FSAQPARLRS RAAAAGGQRR    50
GRLLVVRAAR GKFERTKPHV NIGTIGHVDH GKTTLTAALT MVLASVGGSA 100
PKKYDEIDAA PEERARGITI NTATVEYETE TRHYAHVDCP GHADYVKNMI 150
TGAAQMDGAI LVVSGADGPM PQTKEHILLA KQVGVPKIVV FLNKKDMVDD 200
EELLELVELE VRELLSNYEY DGDDVPIIAG SALKALEALM ANPALKRGDN 250
EWVDYIFNLV DEVDNYIPVP QRQTDLPFLL AVEDVFSITG RGTVATGRIE 300
RGTVKVGDTV DIVGIRDTRT CTVTGVEMFQ KTMDDAMAGD NVGLLLRGMQ 350
KDDIERGMVL AKPGSITPHT KFEAVVYVLK KEEGGRHSPF FPGYRPQFYM 400
RTTDVTGSVT TIMNDKDEEA KMCMPGDRIK MIVQLIQPVA CEQGMRFAIR 450
EGGKTVGAGV INKIIE 466
Length:466
Mass (Da):50,721
Last modified:September 1, 2009 - v1
Checksum:iCB3401CB8BF46A9E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000763 Genomic DNA. Translation: EES05366.1.
RefSeqiXP_002452390.1. XM_002452345.1.

Genome annotation databases

EnsemblPlantsiSb04g024850.1; Sb04g024850.1; Sb04g024850.
GeneIDi8056476.
KEGGisbi:SORBI_04g024850.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000763 Genomic DNA. Translation: EES05366.1 .
RefSeqi XP_002452390.1. XM_002452345.1.

3D structure databases

ProteinModelPortali C5XWJ8.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 4558.Sb04g024850.1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi Sb04g024850.1 ; Sb04g024850.1 ; Sb04g024850 .
GeneIDi 8056476.
KEGGi sbi:SORBI_04g024850.

Organism-specific databases

Gramenei C5XWJ8.

Phylogenomic databases

eggNOGi COG0050.
HOGENOMi HOG000229290.
KOi K02358.
OMAi TTIMNDK.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
HAMAPi MF_00118_B. EF_Tu_B.
InterProi IPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view ]
Pfami PF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view ]
PRINTSi PR00315. ELONGATNFCT.
SUPFAMi SSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEi PS00301. EFACTOR_GTP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. BTx623.

Entry informationi

Entry nameiC5XWJ8_SORBI
AccessioniPrimary (citable) accession number: C5XWJ8
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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