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Protein
Submitted name:

Putative uncharacterized protein Sb04g022560

Gene

Sb04g022560

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein Sb04g022560Imported
Gene namesi
Name:Sb04g022560Imported
ORF Names:SORBIDRAFT_04g022560Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeSorghinaeSorghum
Proteomesi
  • UP000000768 Componenti: Chromosome 4

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei431 – 45020HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb04g022560.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini119 – 346228PEROXIDASE_4InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the peroxidase family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IG24. Eukaryota.
COG0376. LUCA.
HOGENOMiHOG000189824.
InParanoidiC5XU80.
KOiK00434.
OrthoDBiEOG09360BRN.

Family and domain databases

InterProiIPR002207. Asc_peroxidase.
IPR010255. Haem_peroxidase.
IPR002016. Haem_peroxidase_pln/fun/bac.
IPR019793. Peroxidases_heam-ligand_BS.
[Graphical view]
PfamiPF00141. peroxidase. 1 hit.
[Graphical view]
PRINTSiPR00459. ASPEROXIDASE.
PR00458. PEROXIDASE.
SUPFAMiSSF48113. SSF48113. 1 hit.
PROSITEiPS00435. PEROXIDASE_1. 1 hit.
PS50873. PEROXIDASE_4. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5XU80-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAERLAASLL PAASPSPSAR RATVAAAAAA SFPSPCSARA GLRLRSRQPL
60 70 80 90 100
LSQKAAGRGR GVRVVRCMAA SDAAQLKAAQ EDIKELLKTT YCHPILVRLG
110 120 130 140 150
WHDSGTYDKN IEEWPQRGGA DGSLRFDAEL SHGANAGLIN ALKLIQPIKD
160 170 180 190 200
KYPGITYADL FQLASATAIE EAGGPKIPMK YGRVDVTAAE QCPPEGRLPD
210 220 230 240 250
AGPRDPAEHL REVFYRMGLD DKEIVALSGA HTLGRSRPDR SGWGKPETKY
260 270 280 290 300
TKDGPGEPGG QSWTVEWLKF DNSYFKDMKF LSQLPSEEQK EQDLLVLPTD
310 320 330 340 350
AALFEDPSFK VYAEKYAEDQ EAFFKDYAEA HAKLSDLGSK FDPPEGFSLD
360 370 380 390 400
DDMSTAPADE KTEEPTPEPV AAAITTATAD DNNGAAPQPE PFVAAKYSYG
410 420 430 440 450
KRELSESMKQ KIRAEYEGFG GSPDKPMQSN YFLNIMILIA GLAFLTSLVG

N
Length:451
Mass (Da):48,965
Last modified:September 1, 2009 - v1
Checksum:i5C3FF00C87C8CDD1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000763 Genomic DNA. Translation: EES06952.1.
RefSeqiXP_002453976.1. XM_002453931.1.
UniGeneiSbi.8377.

Genome annotation databases

EnsemblPlantsiSb04g022560.1; Sb04g022560.1; Sb04g022560.
GeneIDi8064261.
GrameneiSb04g022560.1; Sb04g022560.1; Sb04g022560.
KEGGisbi:SORBI_04g022560.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000763 Genomic DNA. Translation: EES06952.1.
RefSeqiXP_002453976.1. XM_002453931.1.
UniGeneiSbi.8377.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4558.Sb04g022560.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiSb04g022560.1; Sb04g022560.1; Sb04g022560.
GeneIDi8064261.
GrameneiSb04g022560.1; Sb04g022560.1; Sb04g022560.
KEGGisbi:SORBI_04g022560.

Phylogenomic databases

eggNOGiENOG410IG24. Eukaryota.
COG0376. LUCA.
HOGENOMiHOG000189824.
InParanoidiC5XU80.
KOiK00434.
OrthoDBiEOG09360BRN.

Family and domain databases

InterProiIPR002207. Asc_peroxidase.
IPR010255. Haem_peroxidase.
IPR002016. Haem_peroxidase_pln/fun/bac.
IPR019793. Peroxidases_heam-ligand_BS.
[Graphical view]
PfamiPF00141. peroxidase. 1 hit.
[Graphical view]
PRINTSiPR00459. ASPEROXIDASE.
PR00458. PEROXIDASE.
SUPFAMiSSF48113. SSF48113. 1 hit.
PROSITEiPS00435. PEROXIDASE_1. 1 hit.
PS50873. PEROXIDASE_4. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiC5XU80_SORBI
AccessioniPrimary (citable) accession number: C5XU80
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: September 7, 2016
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.