C5XU80 (C5XU80_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb04g022560 EMBL EES06952.1

Gene names

Name:	Sb04g022560 EMBL EES06952.1
ORF Names:	SORBIDRAFT_04g022560 EMBL EES06952.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare) [Reference proteome]

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › Liliopsida › commelinids › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	451 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the peroxidase family. RuleBase RU004241

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	response to oxidative stress Inferred from electronic annotation. Source: InterPro
Cellular_component	chloroplast Inferred from electronic annotation. Source: EnsemblPlants/Gramene membrane Inferred from electronic annotation. Source: EnsemblPlants/Gramene mitochondrion Inferred from electronic annotation. Source: EnsemblPlants/Gramene thylakoid Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Molecular_function	heme binding Inferred from electronic annotation. Source: InterPro peroxidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5XU80 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: 5C3FF00C87C8CDD1	FASTA	451	48,965
	10 20 30 40 50 60 MAERLAASLL PAASPSPSAR RATVAAAAAA SFPSPCSARA GLRLRSRQPL LSQKAAGRGR 70 80 90 100 110 120 GVRVVRCMAA SDAAQLKAAQ EDIKELLKTT YCHPILVRLG WHDSGTYDKN IEEWPQRGGA 130 140 150 160 170 180 DGSLRFDAEL SHGANAGLIN ALKLIQPIKD KYPGITYADL FQLASATAIE EAGGPKIPMK 190 200 210 220 230 240 YGRVDVTAAE QCPPEGRLPD AGPRDPAEHL REVFYRMGLD DKEIVALSGA HTLGRSRPDR 250 260 270 280 290 300 SGWGKPETKY TKDGPGEPGG QSWTVEWLKF DNSYFKDMKF LSQLPSEEQK EQDLLVLPTD 310 320 330 340 350 360 AALFEDPSFK VYAEKYAEDQ EAFFKDYAEA HAKLSDLGSK FDPPEGFSLD DDMSTAPADE 370 380 390 400 410 420 KTEEPTPEPV AAAITTATAD DNNGAAPQPE PFVAAKYSYG KRELSESMKQ KIRAEYEGFG 430 440 450 GSPDKPMQSN YFLNIMILIA GLAFLTSLVG N

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000763 Genomic DNA. Translation: EES06952.1.
RefSeq	XP_002453976.1. XM_002453931.1.
UniGene	Sbi.8377.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	4558.Sb04g022560.1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb04g022560.1; Sb04g022560.1; Sb04g022560.
GeneID	8064261.
KEGG	sbi:SORBI_04g022560.
Organism-specific databases
Gramene	C5XU80.
Phylogenomic databases
eggNOG	COG0376.
HOGENOM	HOG000189824.
KO	K00434.
ProtClustDB	CLSN2692820.
Family and domain databases
InterPro	IPR002207. Asc_peroxidase. IPR010255. Haem_peroxidase. IPR002016. Haem_peroxidase_pln/fun/bac. IPR019793. Peroxidases_heam-ligand_BS. [Graphical view]
Pfam	PF00141. peroxidase. 1 hit. [Graphical view]
PRINTS	PR00459. ASPEROXIDASE. PR00458. PEROXIDASE.
SUPFAM	SSF48113. Peroxidase_super. 1 hit.
PROSITE	PS00435. PEROXIDASE_1. 1 hit. PS50873. PEROXIDASE_4. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5XU80_SORBI

Accession

Primary (citable) accession number: C5XU80

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	April 3, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)