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C5XTD4

- C5XTD4_SORBI

UniProt

C5XTD4 - C5XTD4_SORBI

Protein
Submitted name:

Putative uncharacterized protein Sb04g021540

Gene

Sb04g021540

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi
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    • History
      Entry version 36 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. 1,4-alpha-glucan branching enzyme activity Source: InterPro
    2. cation binding Source: InterPro
    3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. cellular response to fructose stimulus Source: EnsemblPlants/Gramene
    2. cellular response to glucose stimulus Source: EnsemblPlants/Gramene
    3. cellular response to light stimulus Source: EnsemblPlants/Gramene
    4. cellular response to sucrose stimulus Source: EnsemblPlants/Gramene
    5. glycogen biosynthetic process Source: InterPro
    6. starch metabolic process Source: EnsemblPlants/Gramene

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized protein Sb04g021540Imported
    Gene namesi
    Name:Sb04g021540Imported
    ORF Names:SORBIDRAFT_04g021540Imported
    OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
    Taxonomic identifieri4558 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
    ProteomesiUP000000768: Chromosome 4

    Organism-specific databases

    GrameneiC5XTD4.

    Structurei

    3D structure databases

    ProteinModelPortaliC5XTD4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK00700.
    OMAiTPNDHAR.

    Family and domain databases

    Gene3Di2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000463. GlgB. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C5XTD4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAAFAVSGAA LGGAVRAPRL TGGEEGSLVF RRTGPFLTRA GGARVGGSGT    50
    HGAMRAAAAS SRKAVVVAEG ENDGLASKAD SAQFQSDELE VPDVTEETMC 100
    DAGVADAQAL NRVRVVPPPS DGQKIFQIDP MLQGYKYHLE YRYSLYRRIR 150
    SDIDEHEGGL EAFSRSYEKF GFNRSAEGIT YREWAPGALS AALVGDFNNW 200
    DPNADRMSKN EFGVWEIFLP NNADGTSPIP HGTRVKVRMD TPSGIKDSIP 250
    AWIKYSVQAP GEIPYDGLYY DPPEEVKYVF KHPKPKRPKS LRIYETHVGM 300
    SSPEPKINTY ANFRDEVLPR IKKLGYNAVQ IMAIQEHSYY GSFGYHVTNF 350
    FAPSSRFGTP EDLKSMIDRA HELGLLVLMD VVHSHASSNT LDGLNGFDGT 400
    DTHYFHSGPR GHHWMWDSRL FNYGNWEVLR FLLSNARWWL EEYKFDGFRF 450
    DGVTSMMYTH HGLQVTFTGN FNEYFGFATD VDAVVYLMLV NDLIHGLYPE 500
    AVTIGEDVSG MPTFALPVQD GGVGFDYRMH MAVADKWIEL LKQSDEAWKM 550
    GDIVHTLTNR RWLEKCVTYA ESHDQALVGD KTIAFWLMDK DMYDFMALDR 600
    PATPTIDRGI ALHKMIRLIT MGLGGEGYLN FMGNEFGHPE WIDFPRGPQR 650
    LPSGKFIPGN NNSYDKCRRR FDLGDADYLR YRGMQEFDQA MQHLEQKYGF 700
    MTSDHQYISR KHEEDKMIVF EKGDLVFVFN FHCNNSYFDY RIGCRKPGMY 750
    KVVLDSDAGL FGGFGRIHHA AEHFTTDCSH DNRPHSFSVY TPSRTCVVYA 800
    PAE 803
    Length:803
    Mass (Da):90,755
    Last modified:September 1, 2009 - v1
    Checksum:i6FAC41C9AB621378
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000763 Genomic DNA. Translation: EES06902.1.
    RefSeqiXP_002453926.1. XM_002453881.1.
    UniGeneiSbi.4641.

    Genome annotation databases

    EnsemblPlantsiSb04g021540.1; Sb04g021540.1; Sb04g021540.
    GeneIDi8059621.
    KEGGisbi:SORBI_04g021540.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000763 Genomic DNA. Translation: EES06902.1 .
    RefSeqi XP_002453926.1. XM_002453881.1.
    UniGenei Sbi.4641.

    3D structure databases

    ProteinModelPortali C5XTD4.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi Sb04g021540.1 ; Sb04g021540.1 ; Sb04g021540 .
    GeneIDi 8059621.
    KEGGi sbi:SORBI_04g021540.

    Organism-specific databases

    Gramenei C5XTD4.

    Phylogenomic databases

    KOi K00700.
    OMAi TPNDHAR.

    Family and domain databases

    Gene3Di 2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000463. GlgB. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. BTx623Imported.

    Entry informationi

    Entry nameiC5XTD4_SORBI
    AccessioniPrimary (citable) accession number: C5XTD4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 36 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3