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C5XTD4

- C5XTD4_SORBI

UniProt

C5XTD4 - C5XTD4_SORBI

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Protein
Submitted name:

Putative uncharacterized protein Sb04g021540

Gene
Sb04g021540, SORBIDRAFT_04g021540
Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: InterPro
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. cellular response to fructose stimulus Source: EnsemblPlants/Gramene
  2. cellular response to glucose stimulus Source: EnsemblPlants/Gramene
  3. cellular response to light stimulus Source: EnsemblPlants/Gramene
  4. cellular response to sucrose stimulus Source: EnsemblPlants/Gramene
  5. glycogen biosynthetic process Source: InterPro
  6. starch metabolic process Source: EnsemblPlants/Gramene
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein Sb04g021540Imported
Gene namesi
Name:Sb04g021540Imported
ORF Names:SORBIDRAFT_04g021540Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
ProteomesiUP000000768: Chromosome 4

Organism-specific databases

GrameneiC5XTD4.

Structurei

3D structure databases

ProteinModelPortaliC5XTD4.

Family & Domainsi

Phylogenomic databases

KOiK00700.
OMAiTPNDHAR.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.

Sequencei

Sequence statusi: Complete.

C5XTD4-1 [UniParc]FASTAAdd to Basket

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MAAFAVSGAA LGGAVRAPRL TGGEEGSLVF RRTGPFLTRA GGARVGGSGT    50
HGAMRAAAAS SRKAVVVAEG ENDGLASKAD SAQFQSDELE VPDVTEETMC 100
DAGVADAQAL NRVRVVPPPS DGQKIFQIDP MLQGYKYHLE YRYSLYRRIR 150
SDIDEHEGGL EAFSRSYEKF GFNRSAEGIT YREWAPGALS AALVGDFNNW 200
DPNADRMSKN EFGVWEIFLP NNADGTSPIP HGTRVKVRMD TPSGIKDSIP 250
AWIKYSVQAP GEIPYDGLYY DPPEEVKYVF KHPKPKRPKS LRIYETHVGM 300
SSPEPKINTY ANFRDEVLPR IKKLGYNAVQ IMAIQEHSYY GSFGYHVTNF 350
FAPSSRFGTP EDLKSMIDRA HELGLLVLMD VVHSHASSNT LDGLNGFDGT 400
DTHYFHSGPR GHHWMWDSRL FNYGNWEVLR FLLSNARWWL EEYKFDGFRF 450
DGVTSMMYTH HGLQVTFTGN FNEYFGFATD VDAVVYLMLV NDLIHGLYPE 500
AVTIGEDVSG MPTFALPVQD GGVGFDYRMH MAVADKWIEL LKQSDEAWKM 550
GDIVHTLTNR RWLEKCVTYA ESHDQALVGD KTIAFWLMDK DMYDFMALDR 600
PATPTIDRGI ALHKMIRLIT MGLGGEGYLN FMGNEFGHPE WIDFPRGPQR 650
LPSGKFIPGN NNSYDKCRRR FDLGDADYLR YRGMQEFDQA MQHLEQKYGF 700
MTSDHQYISR KHEEDKMIVF EKGDLVFVFN FHCNNSYFDY RIGCRKPGMY 750
KVVLDSDAGL FGGFGRIHHA AEHFTTDCSH DNRPHSFSVY TPSRTCVVYA 800
PAE 803
Length:803
Mass (Da):90,755
Last modified:September 1, 2009 - v1
Checksum:i6FAC41C9AB621378
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000763 Genomic DNA. Translation: EES06902.1.
RefSeqiXP_002453926.1. XM_002453881.1.
UniGeneiSbi.4641.

Genome annotation databases

EnsemblPlantsiSb04g021540.1; Sb04g021540.1; Sb04g021540.
GeneIDi8059621.
KEGGisbi:SORBI_04g021540.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000763 Genomic DNA. Translation: EES06902.1 .
RefSeqi XP_002453926.1. XM_002453881.1.
UniGenei Sbi.4641.

3D structure databases

ProteinModelPortali C5XTD4.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi Sb04g021540.1 ; Sb04g021540.1 ; Sb04g021540 .
GeneIDi 8059621.
KEGGi sbi:SORBI_04g021540.

Organism-specific databases

Gramenei C5XTD4.

Phylogenomic databases

KOi K00700.
OMAi TPNDHAR.

Family and domain databases

Gene3Di 2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. BTx623.

Entry informationi

Entry nameiC5XTD4_SORBI
AccessioniPrimary (citable) accession number: C5XTD4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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