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C5XTD4 (C5XTD4_SORBI) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Sb04g021540 EMBL EES06902.1
ORF Names:SORBIDRAFT_04g021540 EMBL EES06902.1
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare) [Reference proteome]
Taxonomic identifier4558 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum

Protein attributes

Sequence length803 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
C5XTD4 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 6FAC41C9AB621378

FASTA80390,755
        10         20         30         40         50         60 
MAAFAVSGAA LGGAVRAPRL TGGEEGSLVF RRTGPFLTRA GGARVGGSGT HGAMRAAAAS 

        70         80         90        100        110        120 
SRKAVVVAEG ENDGLASKAD SAQFQSDELE VPDVTEETMC DAGVADAQAL NRVRVVPPPS 

       130        140        150        160        170        180 
DGQKIFQIDP MLQGYKYHLE YRYSLYRRIR SDIDEHEGGL EAFSRSYEKF GFNRSAEGIT 

       190        200        210        220        230        240 
YREWAPGALS AALVGDFNNW DPNADRMSKN EFGVWEIFLP NNADGTSPIP HGTRVKVRMD 

       250        260        270        280        290        300 
TPSGIKDSIP AWIKYSVQAP GEIPYDGLYY DPPEEVKYVF KHPKPKRPKS LRIYETHVGM 

       310        320        330        340        350        360 
SSPEPKINTY ANFRDEVLPR IKKLGYNAVQ IMAIQEHSYY GSFGYHVTNF FAPSSRFGTP 

       370        380        390        400        410        420 
EDLKSMIDRA HELGLLVLMD VVHSHASSNT LDGLNGFDGT DTHYFHSGPR GHHWMWDSRL 

       430        440        450        460        470        480 
FNYGNWEVLR FLLSNARWWL EEYKFDGFRF DGVTSMMYTH HGLQVTFTGN FNEYFGFATD 

       490        500        510        520        530        540 
VDAVVYLMLV NDLIHGLYPE AVTIGEDVSG MPTFALPVQD GGVGFDYRMH MAVADKWIEL 

       550        560        570        580        590        600 
LKQSDEAWKM GDIVHTLTNR RWLEKCVTYA ESHDQALVGD KTIAFWLMDK DMYDFMALDR 

       610        620        630        640        650        660 
PATPTIDRGI ALHKMIRLIT MGLGGEGYLN FMGNEFGHPE WIDFPRGPQR LPSGKFIPGN 

       670        680        690        700        710        720 
NNSYDKCRRR FDLGDADYLR YRGMQEFDQA MQHLEQKYGF MTSDHQYISR KHEEDKMIVF 

       730        740        750        760        770        780 
EKGDLVFVFN FHCNNSYFDY RIGCRKPGMY KVVLDSDAGL FGGFGRIHHA AEHFTTDCSH 

       790        800 
DNRPHSFSVY TPSRTCVVYA PAE 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000763 Genomic DNA. Translation: EES06902.1.
RefSeqXP_002453926.1. XM_002453881.1.
UniGeneSbi.4641.

3D structure databases

ProteinModelPortalC5XTD4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsSb04g021540.1; Sb04g021540.1; Sb04g021540.
GeneID8059621.
KEGGsbi:SORBI_04g021540.

Organism-specific databases

GrameneC5XTD4.

Phylogenomic databases

KOK00700.
OMATPNDHAR.

Family and domain databases

Gene3D2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFPIRSF000463. GlgB. 1 hit.
SUPFAMSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC5XTD4_SORBI
AccessionPrimary (citable) accession number: C5XTD4
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)