C5XTB7 (C5XTB7_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb04g021370 EMBL EES05163.1

Gene names

Name:	Sb04g021370 EMBL EES05163.1
ORF Names:	SORBIDRAFT_04g021370 EMBL EES05163.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare)

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	707 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular function	AMP binding Inferred from electronic annotation. Source: InterPro acetate-CoA ligase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5XTB7 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: 3CF29C45E4689BFC	FASTA	707	78,228
	10 20 30 40 50 60 MGTANGQQPA AEGASSDKLR HVESMSELPS GAGKISGINA VVLGESLAAE ENDLIFPSSD 70 80 90 100 110 120 FSANALVSSP KQYREMYERS IKNPAGFWSE IAETFYWKEK WNPAEVCSEN LDVTKGPVQI 130 140 150 160 170 180 NWFKGGKTNI CYNAVDRNIE SGNGDKIAMY WEGNEPSQDG KLTYSELLEK VCQLANYLKS 190 200 210 220 230 240 LGVGKGDAVI IYLPMLLELP IAMLACARIG AVHSVVFAGF SADSLAQRIV DCKPKLVITC 250 260 270 280 290 300 NAVKRGVKPI FLKDIVDVAL VESEKNGVSV GLCLTYENQS AMKREDTKWQ PERDVWWQDV 310 320 330 340 350 360 VTKFPTKCDV EWVDAEDPLF LLYTSGSTGK PKGVLHTSGG YMVYTATTFK YAFDYKPTDI 370 380 390 400 410 420 YWCTADCGWI TGHSYVTYGP LLNGATVLVF EGTPNYPDSG RCWDIVDKYN VTIFYTAPTL 430 440 450 460 470 480 VRSLMRDGTE YVTRYSRKSL RVLGSVGEPI NPSAWRWFYN IVGDSRCPIS DTWWQTETGG 490 500 510 520 530 540 FMITPLPGAW PQKPGSATFP FFGVQPVIVD EKGQEIEGEC SGYLCIKKSW PGAFRTLYGD 550 560 570 580 590 600 HERYETTYFK PFAGYYFTGD GCSRDKDGYH WLTGRVDDVI NVSGHRIGTA EVESALVSHP 610 620 630 640 650 660 QCAEAAVVGV EHEVKGQGIY AFVTLVDGVP YSEELRKSLI MTVRNQIGAF AAPDKIHWAP 670 680 690 700 GLPKTRSGKI MRRILRKIAA RQLDELGDIS TLAEPAVVDQ LIALSDC

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed: 19189423] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000763 Genomic DNA. Translation: EES05163.1.
RefSeq	XP_002452187.1. XM_002452142.1.
UniGene	Sbi.5233.
3D structure databases
ProteinModelPortal	C5XTB7.
ModBase	Search...
Protein-protein interaction databases
STRING	C5XTB7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb04g021370.1; Sb04g021370.1; Sb04g021370.
GeneID	8059611.
KEGG	sbi:SORBI_04g021370.
Phylogenomic databases
GeneTree	EPGT00070000028786.
OMA	FREDIVF.
PhylomeDB	C5XTB7.
ProtClustDB	PLN02654.
Family and domain databases
InterPro	IPR011904. Ac_CoA_lig. IPR024597. Acyl-CoA_synth_DUF3448. IPR020845. AMP-binding_CS. IPR000873. AMP-dep_Synth/Lig. [Graphical view]
KO	K01895.
PANTHER	PTHR24095:SF42. PTHR24095:SF42. 1 hit.
Pfam	PF00501. AMP-binding. 1 hit. PF11930. DUF3448. 1 hit. [Graphical view]
TIGRFAMs	TIGR02188. Ac_CoA_lig_AcsA. 1 hit.
PROSITE	PS00455. AMP_BINDING. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5XTB7_SORBI

Accession

Primary (citable) accession number: C5XTB7

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	December 14, 2011
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)