C5XSD0 (C5XSD0_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb04g001370 EMBL EES04371.1

Gene names

Name:	Sb04g001370 EMBL EES04371.1
ORF Names:	SORBIDRAFT_04g001370 EMBL EES04371.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare)

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	448 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	protein glycosylation Inferred from electronic annotation. Source: InterPro
Cellular component	integral to Golgi membrane Inferred from electronic annotation. Source: InterPro
Molecular function	sialyltransferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5XSD0 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: B161A02E0FA98EFE	FASTA	448	49,374
	10 20 30 40 50 60 MAPRAAPALR VLPLALAAAI FSGLTAILIY LSGVSSSHGG ARLSEADLAA LAALRGSFSK 70 80 90 100 110 120 CVDANGLGLK AVTGEDYCRV VIQYPSDTVS KWRDPITHKV EGLSFEFNLC EAVSSWEQVR 130 140 150 160 170 180 NSTTVLTKEY IDALPNGWEE YAWRRINKGI LLNKCQNRSL CMEKLSLVLP ETSPYVPHQF 190 200 210 220 230 240 GRCAVVGNSG DLLKTKFGDE IDSYDAVFRE NGAPTQSYTE YVGTKSTFRL LNRGSAKALD 250 260 270 280 290 300 KVVELDETKK EVLIVKTTIH DIMNQMIREL PITNPVYLML GTSFGSSAKG TGLKALEFAL 310 320 330 340 350 360 SICDSVDMYG FTVDPGYKEW TRYFSEVRKG HTPLHGRAYY QMMECLGLVK IHSPMRGDPG 370 380 390 400 410 420 RTVKWLPTRA TIEAARVASE KLLKRPGAGS NGPLGTCTMI KKRRKGNEPN RSGLRDAAMK 430 440 HLEDMKGVTR YPLERNAGGG YLCLINDR

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed: 19189423] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000763 Genomic DNA. Translation: EES04371.1.
RefSeq	XP_002451395.1. XM_002451350.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb04g001370.1; Sb04g001370.1; Sb04g001370.
GeneID	8085211.
KEGG	sbi:SORBI_04g001370.
Phylogenomic databases
GeneTree	EPGT00070000031785.
OMA	PLHGRAY.
PhylomeDB	C5XSD0.
ProtClustDB	CLSN2680364.
Family and domain databases
InterPro	IPR001675. Glyco_trans_29. [Graphical view]
Pfam	PF00777. Glyco_transf_29. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5XSD0_SORBI

Accession

Primary (citable) accession number: C5XSD0

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	December 14, 2011
This is version 12 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)