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C5XS18

- C5XS18_SORBI

UniProt

C5XS18 - C5XS18_SORBI

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Protein
Submitted name: Putative uncharacterized protein Sb04g033260
Gene
Sb04g033260, SORBIDRAFT_04g033260
Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone].UniRule annotationSAAS annotations

GO - Molecular functioni

  1. histone-lysine N-methyltransferase activity Source: InterPro
  2. zinc ion binding Source: InterPro
Complete GO annotation...

GO - Biological processi

    Complete GO annotation...

    Keywords - Molecular functioni

    MethyltransferaseUniRule annotation, Transferase

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized protein Sb04g033260Imported
    Gene namesi
    Name:Sb04g033260Imported
    ORF Names:SORBIDRAFT_04g033260Imported
    OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)
    Taxonomic identifieri4558 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
    ProteomesiUP000000768: Chromosome 4

    Organism-specific databases

    GrameneiC5XS18.

    Subcellular locationi

    Nucleus By similarity UniRule annotation

    GO - Cellular componenti

    1. chromosome Source: UniProtKB-KW
    2. nucleus Source: UniProtKB-SubCell
    Complete GO annotation...

    Keywords - Cellular componenti

    ChromosomeSAAS annotations, NucleusUniRule annotationSAAS annotations

    Interactioni

    Protein-protein interaction databases

    STRINGi4558.Sb04g033260.1.

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 SET domain.
    Contains 1 post-SET domain.UniRule annotation
    Contains 1 pre-SET domain.UniRule annotation
    Contains SET domain.SAAS annotations
    Contains pre-SET domain.SAAS annotations

    Phylogenomic databases

    eggNOGiCOG2940.
    HOGENOMiHOG000146355.
    KOiK11420.

    Family and domain databases

    Gene3Di2.30.280.10. 1 hit.
    InterProiIPR003616. Post-SET_dom.
    IPR007728. Pre-SET_dom.
    IPR015947. PUA-like_domain.
    IPR001214. SET_dom.
    IPR003105. SRA_YDG.
    [Graphical view]
    PfamiPF05033. Pre-SET. 1 hit.
    PF02182. SAD_SRA. 1 hit.
    PF00856. SET. 1 hit.
    [Graphical view]
    SMARTiSM00317. SET. 1 hit.
    [Graphical view]
    SUPFAMiSSF88697. SSF88697. 1 hit.
    PROSITEiPS50868. POST_SET. 1 hit.
    PS50867. PRE_SET. 1 hit.
    PS50280. SET. 1 hit.
    PS51015. YDG. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C5XS18-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEGGGGGGGG APVSPTAGGA RRHKVLAPWR FQIGFVRREM NAGVVSDGKQ    50
    GALETPQMSC QTATSDVPSV SLNDGGGVDG ESPAADGENE VPNNRGAGAV 100
    DGANRGLGGV DGNPAAKEGD SLPKDGEFLV DLENDGVTAD PHGMAKPSDL 150
    PGFQNNGPTE EINLAVNNSE GFVTSEGTVP GCRKGRKTVV PWRFQIGHQP 200
    KWSQNLFSGN RSNGKAEDPT SKVGDRSRKD APAMARNHSC LKGSATSGQS 250
    SVRIPKGTGS APKKRKVDKD DQYEATVNNR ISVVRENVLT TLRAFRIIYE 300
    KLLEEEQIKW RERGHGLSPD LAAFNIFRKR FCANYDDLKY DGSIPGVRIG 350
    DVFNSVMELY IVGIHRAQSL PVDHIKKKDG TCLAVSVVSY AQPSVFDSLD 400
    FLLHVGSVTD TCDQEMEGTD LALKESMDTD TPVRVIHAVV TDLGDDCQPK 450
    QLTSYVYGGL YLVEKFNREK TSGSQYVSIF HLRRMTGQKH IDLQVLKTKM 500
    PESFAGTFII DISGGLEKVP ISAINSISNE YLTTFHYISQ IQYPLKYRPD 550
    PPSGCDCVGG CSVSQKCACA VKNGGGFHFN DIGGLTEGKP LIYECGPSCK 600
    CPPTCRNRVS QHGIKFRLQV FKTKSMGWGV RTLDFIPDGS FVCEYVGELL 650
    TDEEAQERKN DEYLFAIGNS YYDAPHWEAE IKAIPSLQNG PIEDDETVFA 700
    VDALNQGNFA RFINHCCTPN LFPQNVLHDH DNISMPHIMF FASEDIPPLK 750
    ELSYDYNYQI DKVYDSDGNI KMKYCFCGSN ECNGRLY 787
    Length:787
    Mass (Da):86,021
    Last modified:September 1, 2009 - v1
    Checksum:i8453434594E56549
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000763 Genomic DNA. Translation: EES05802.1.
    RefSeqiXP_002452826.1. XM_002452781.1.

    Genome annotation databases

    EnsemblPlantsiSb04g033260.1; Sb04g033260.1; Sb04g033260.
    GeneIDi8076250.
    KEGGisbi:SORBI_04g033260.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000763 Genomic DNA. Translation: EES05802.1 .
    RefSeqi XP_002452826.1. XM_002452781.1.

    3D structure databases

    ModBasei Search...

    Protein-protein interaction databases

    STRINGi 4558.Sb04g033260.1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi Sb04g033260.1 ; Sb04g033260.1 ; Sb04g033260 .
    GeneIDi 8076250.
    KEGGi sbi:SORBI_04g033260.

    Organism-specific databases

    Gramenei C5XS18.

    Phylogenomic databases

    eggNOGi COG2940.
    HOGENOMi HOG000146355.
    KOi K11420.

    Family and domain databases

    Gene3Di 2.30.280.10. 1 hit.
    InterProi IPR003616. Post-SET_dom.
    IPR007728. Pre-SET_dom.
    IPR015947. PUA-like_domain.
    IPR001214. SET_dom.
    IPR003105. SRA_YDG.
    [Graphical view ]
    Pfami PF05033. Pre-SET. 1 hit.
    PF02182. SAD_SRA. 1 hit.
    PF00856. SET. 1 hit.
    [Graphical view ]
    SMARTi SM00317. SET. 1 hit.
    [Graphical view ]
    SUPFAMi SSF88697. SSF88697. 1 hit.
    PROSITEi PS50868. POST_SET. 1 hit.
    PS50867. PRE_SET. 1 hit.
    PS50280. SET. 1 hit.
    PS51015. YDG. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. BTx623.

    Entry informationi

    Entry nameiC5XS18_SORBI
    AccessioniPrimary (citable) accession number: C5XS18
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: July 9, 2014
    This is version 35 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    External Data

    Dasty 3

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