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C5XS18 (C5XS18_SORBI) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Sb04g033260 EMBL EES05802.1
ORF Names:SORBIDRAFT_04g033260 EMBL EES05802.1
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare) [Reference proteome]
Taxonomic identifier4558 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum

Protein attributes

Sequence length787 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone]. RuleBase RU004542 SAAS SAAS001214

Subcellular location

Nucleus By similarity RuleBase RU004542.

Sequence similarities

Contains 1 SET domain.

Contains 1 post-SET domain. RuleBase RU004541

Contains 1 pre-SET domain. RuleBase RU004542

Contains SET domain. SAAS SAAS001214

Contains pre-SET domain. SAAS SAAS001214

Sequences

Sequence LengthMass (Da)Tools
C5XS18 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 8453434594E56549

FASTA78786,021
        10         20         30         40         50         60 
MEGGGGGGGG APVSPTAGGA RRHKVLAPWR FQIGFVRREM NAGVVSDGKQ GALETPQMSC 

        70         80         90        100        110        120 
QTATSDVPSV SLNDGGGVDG ESPAADGENE VPNNRGAGAV DGANRGLGGV DGNPAAKEGD 

       130        140        150        160        170        180 
SLPKDGEFLV DLENDGVTAD PHGMAKPSDL PGFQNNGPTE EINLAVNNSE GFVTSEGTVP 

       190        200        210        220        230        240 
GCRKGRKTVV PWRFQIGHQP KWSQNLFSGN RSNGKAEDPT SKVGDRSRKD APAMARNHSC 

       250        260        270        280        290        300 
LKGSATSGQS SVRIPKGTGS APKKRKVDKD DQYEATVNNR ISVVRENVLT TLRAFRIIYE 

       310        320        330        340        350        360 
KLLEEEQIKW RERGHGLSPD LAAFNIFRKR FCANYDDLKY DGSIPGVRIG DVFNSVMELY 

       370        380        390        400        410        420 
IVGIHRAQSL PVDHIKKKDG TCLAVSVVSY AQPSVFDSLD FLLHVGSVTD TCDQEMEGTD 

       430        440        450        460        470        480 
LALKESMDTD TPVRVIHAVV TDLGDDCQPK QLTSYVYGGL YLVEKFNREK TSGSQYVSIF 

       490        500        510        520        530        540 
HLRRMTGQKH IDLQVLKTKM PESFAGTFII DISGGLEKVP ISAINSISNE YLTTFHYISQ 

       550        560        570        580        590        600 
IQYPLKYRPD PPSGCDCVGG CSVSQKCACA VKNGGGFHFN DIGGLTEGKP LIYECGPSCK 

       610        620        630        640        650        660 
CPPTCRNRVS QHGIKFRLQV FKTKSMGWGV RTLDFIPDGS FVCEYVGELL TDEEAQERKN 

       670        680        690        700        710        720 
DEYLFAIGNS YYDAPHWEAE IKAIPSLQNG PIEDDETVFA VDALNQGNFA RFINHCCTPN 

       730        740        750        760        770        780 
LFPQNVLHDH DNISMPHIMF FASEDIPPLK ELSYDYNYQI DKVYDSDGNI KMKYCFCGSN 


ECNGRLY 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000763 Genomic DNA. Translation: EES05802.1.
RefSeqXP_002452826.1. XM_002452781.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING4558.Sb04g033260.1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsSb04g033260.1; Sb04g033260.1; Sb04g033260.
GeneID8076250.
KEGGsbi:SORBI_04g033260.

Organism-specific databases

GrameneC5XS18.

Phylogenomic databases

eggNOGCOG2940.
HOGENOMHOG000146355.
KOK11420.

Family and domain databases

Gene3D2.30.280.10. 1 hit.
InterProIPR003616. Post-SET_dom.
IPR007728. Pre-SET_dom.
IPR015947. PUA-like_domain.
IPR001214. SET_dom.
IPR003105. SRA_YDG.
[Graphical view]
PfamPF05033. Pre-SET. 1 hit.
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
SMARTSM00317. SET. 1 hit.
[Graphical view]
SUPFAMSSF88697. SSF88697. 1 hit.
PROSITEPS50868. POST_SET. 1 hit.
PS50867. PRE_SET. 1 hit.
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5XS18_SORBI
AccessionPrimary (citable) accession number: C5XS18
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: July 9, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)