C5XRE1 (C5XRE1_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb03g041630 EMBL EES01854.1

Gene names

Name:	Sb03g041630 EMBL EES01854.1
ORF Names:	SORBIDRAFT_03g041630 EMBL EES01854.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare)

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	473 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5XRE1 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: 08947E90A3F52197	FASTA	473	53,905
	10 20 30 40 50 60 MKISKGRKKM RNKQRKSSAL GSDAGCGSSL SCIVWSLVGF GLVVCFLSLK HQADSGQSHV 70 80 90 100 110 120 YFSPLHATRE LEDIEEDHFR LPPPHKVNPR AVKRRGPRKL PKIIDDYLEE SSAVHALFFP 130 140 150 160 170 180 DQRTAVDPTK GGNDSMYFYP GRVWLDTDGN SIQAHGGGIM YDHKHAKFYW YGENKDGPTY 190 200 210 220 230 240 QARPKGPQRV DIIGVSCYSS KDLWSWTHEG IVLPGEPTNV THDLHRSKVL ERPKVIYNDH 250 260 270 280 290 300 TEKYIMWMHI DDANYTKASV GVAVSNSPTG PFTYLYSFRP HGFESRDMTV FKDDDGTAYL 310 320 330 340 350 360 FYSSRDNTEL HVSPLTEDYI QITSAMKRIL IRRHREAPAV FKHQGTYYMI TSGCSGWAPN 370 380 390 400 410 420 RALAHAAESI MGPWETLGNP CVGGNRFYRL TTFLSQSTFV LPLPGLPGTF IFMADRWSPS 430 440 450 460 470 NLRDSRYVWL PLFIGGLADE PVDYSFGFPL WSRVSIYWHK KWRLPEDWKV GYD

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed: 19189423] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000762 Genomic DNA. Translation: EES01854.1.
RefSeq	XP_002456734.1. XM_002456689.1.
3D structure databases
ProteinModelPortal	C5XRE1.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb03g041630.1; Sb03g041630.1; Sb03g041630.
GeneID	8061013.
KEGG	sbi:SORBI_03g041630.
Phylogenomic databases
GeneTree	EPGT00050000013758.
OMA	RRHREAP.
PhylomeDB	C5XRE1.
ProtClustDB	CLSN2684377.
Family and domain databases
InterPro	IPR006710. Glyco_hydro_43. IPR023296. Glyco_hydro_43_beta-prop. [Graphical view]
Gene3D	G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
PANTHER	PTHR22925. Glyco_hydro_43. 1 hit.
Pfam	PF04616. Glyco_hydro_43. 1 hit. [Graphical view]
SUPFAM	SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C5XRE1_SORBI

Accession

Primary (citable) accession number: C5XRE1

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	December 14, 2011
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)