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Protein
Submitted name:

16.9 kDa class 1 small heat shock protein

Gene

SHSP

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Keywordsi

Biological processStress responseImported

Names & Taxonomyi

Protein namesi
Submitted name:
16.9 kDa class 1 small heat shock proteinImported
Gene namesi
Name:SHSPImported
ORF Names:SORBI_3003G082200Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeSorghinaeSorghum
Proteomesi
  • UP000000768 Componenti: Chromosome 3

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb03g006900.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini36 – 150SHSPInterPro annotationAdd BLAST115

Sequence similaritiesi

Belongs to the small heat shock protein (HSP20) family.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG0710 Eukaryota
COG0071 LUCA
HOGENOMiHOG000251751
OMAiFANIRID
OrthoDBiEOG09360TW0

Family and domain databases

Gene3Di2.60.40.790, 1 hit
InterProiView protein in InterPro
IPR002068 A-crystallin/Hsp20_dom
IPR031107 HSP20
IPR008978 HSP20-like_chaperone
PANTHERiPTHR11527 PTHR11527, 1 hit
PfamiView protein in Pfam
PF00011 HSP20, 1 hit
SUPFAMiSSF49764 SSF49764, 1 hit
PROSITEiView protein in PROSITE
PS01031 SHSP, 1 hit

Sequencei

Sequence statusi: Complete.

C5XQS2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLVRRSTNV FDPFADFWDP FDVFRSIVPA ASTDRDTAAF ANARIDWKET
60 70 80 90 100
PEAHVFKADV PGVKKEEVKV EVEDGNVLVI SGERRKEKED KDDKWHRVER
110 120 130 140 150
SSGRFMRRFR LPENAKTEEV KAGLENGVLT VTVPKAEVKK PEVKSVEIAG
Length:150
Mass (Da):17,043
Last modified:September 1, 2009 - v1
Checksum:i5CBC34F6905ACEA1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JX431287 mRNA Translation: AFS68373.1
CM000762 Genomic DNA Translation: EES00359.1
RefSeqiXP_002455239.1, XM_002455194.1

Genome annotation databases

EnsemblPlantsiEES00359; EES00359; SORBI_3003G082200
GrameneiEES00359; EES00359; SORBI_3003G082200

Similar proteinsi

Entry informationi

Entry nameiC5XQS2_SORBI
AccessioniPrimary (citable) accession number: C5XQS2
Entry historyiIntegrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: March 28, 2018
This is version 56 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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