C5XLL0 (C5XLL0_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb03g036080 EMBL EES01547.1

Gene names

Name:	Sb03g036080 EMBL EES01547.1
ORF Names:	SORBIDRAFT_03g036080 EMBL EES01547.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare)

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	583 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Molecular function	calcium ion binding Inferred from electronic annotation. Source: InterPro mannosyl-oligosaccharide 1,2-alpha-mannosidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5XLL0 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: BA82FDFD444EA07F	FASTA	583	65,231
	10 20 30 40 50 60 MQPIRRRHRG FPLLCLSAAL LAAATLLPGA AVAEGVTPSE ARRLRDEVKD MFYHAFDGYM 70 80 90 100 110 120 KYAFPLDELR PLSCQGEDSL GGYALTLIDS LDTLALLGDK EKFGAAVEWV GKNVRFDINK 130 140 150 160 170 180 TVSVFETNIR ILGGLLSAHL IASDYATGMR IQSYDDQLLH LAADLAQRLL PAFDTPTGIP 190 200 210 220 230 240 FGSVNLMYGV DENESKITST AGGGTLTLEF GILSRLTNNT VFERVTKKSV RGIWSRRSKL 250 260 270 280 290 300 NLVGAHINVF TGEWTQKDAG IGTSIDSFYE YLLKAYLLFG DEEYLYIFQE AYKAAMHYLH 310 320 330 340 350 360 HDPWYVEVNM NSGATVWPLF NSLQAFWPGL QVLAGDVDPA IRTHAAFFSV WKKYGFTPEG 370 380 390 400 410 420 FNLATSTVQN GQRSYPLRPE LIESTYWLFK ATRDHRYLDV GRDILASLQY GARCPCGYCH 430 440 450 460 470 480 IADVETHKQD DHMESFFLAE TVKYLWLLFD LAAGPDNIVE SGPYKYIFST EGHLLPVTPE 490 500 510 520 530 540 IALVDEHCSY FGAFCNGGAD HGYGASASST KHQNGNYTQL DDIQTHSSLY STSNVLFKTG 550 560 570 580 GYIKVTLMWF LINIFYSLVT AYVTFVDRKW NNSGLQCVKS KLF

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed: 19189423] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000762 Genomic DNA. Translation: EES01547.1.
RefSeq	XP_002456427.1. XM_002456382.1.
UniGene	Sbi.15871.
3D structure databases
ProteinModelPortal	C5XLL0.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb03g036080.1; Sb03g036080.1; Sb03g036080.
GeneID	8072143.
KEGG	sbi:SORBI_03g036080.
Phylogenomic databases
GeneTree	EPGT00050000018377.
OMA	IGTSIDS.
PhylomeDB	C5XLL0.
ProtClustDB	CLSN2679415.
Family and domain databases
InterPro	IPR001382. Glyco_hydro_47. [Graphical view]
Gene3D	G3DSA:1.50.10.50. Glyco_hydro_47. 1 hit.
KO	K10085.
PANTHER	PTHR11742. Glyco_hydro_47. 1 hit.
Pfam	PF01532. Glyco_hydro_47. 1 hit. [Graphical view]
PRINTS	PR00747. GLYHDRLASE47.
SUPFAM	SSF48225. Glyco_hydro_47. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C5XLL0_SORBI

Accession

Primary (citable) accession number: C5XLL0

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	December 14, 2011
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)