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Protein
Submitted name:

Putative uncharacterized protein Sb03g035090

Gene

Sb03g035090

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein Sb03g035090Imported
Gene namesi
Name:Sb03g035090Imported
Synonyms:ppc3Imported
ORF Names:SORBIDRAFT_03g035090Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
ProteomesiUP000000768 Componenti: Chromosome 3

Organism-specific databases

GrameneiC5XKS5.

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb03g035090.1.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238648.
InParanoidiC5XKS5.
KOiK01595.
OMAiHLSKDIM.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 2 hits.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5XKS5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARNAVDKAT SIDAQLRLLA PQKLSDDDKL VEYDALLLDR FLDILQDLHG
60 70 80 90 100
EDIRETVQEC YELAAEYENK LDPKMLDEIG NVLTDWDRGD SMVITKSFSH
110 120 130 140 150
RLILANLAEE VQMAYRRRIK LKKGDFVDEN SATTESDIEE TLKRLMHQLK
160 170 180 190 200
KSPLEVLDAL KNQTVDLVLT AHPTQSVRRS LLQKHGRIRN CLTQLYAKDI
210 220 230 240 250
TPDEKQELDE ALQREIQAAF RTDEIRRAPP TPQDEMRAGM SYFHETIWKG
260 270 280 290 300
VPKFLRRVDT ALKNIGINER LPYNAPIIQF SSWMGGDRDG NPRVTPEVTR
310 320 330 340 350
DVCLLARMMA ANLYNAQIED LMFELSMWRC SDELRVKVDE LQCSSKKDRT
360 370 380 390 400
KHYIEFWKQV PPSEPYRVIL SDVRDKLYNT RERARHLLAS GFSEIPEEAT
410 420 430 440 450
FTDVEQFLEP LELCYRSLCA CGDQSIADGS LLDFLRQVST FGLSLVRLDI
460 470 480 490 500
RQESDRHTDV MDAITEYLGI GSYRKWTEEK RQEWLLSELN GKRPLFGPDL
510 520 530 540 550
PKSDEIADVL DTFHVLAELP SDSFGAYVIS MATAPSDVLA VELLQRECHV
560 570 580 590 600
KKPLRVVPLF EKLADLEAAP AALARLFSVE WYRNRINGKQ EVMIGYSDSG
610 620 630 640 650
KDAGRFSAAW QLYKAQEELI NVAKMYGVKL TMFHGRGGTV GRGGGPTHLA
660 670 680 690 700
ILSQPPETIH GSLRVTVQGE VIEQSFGEEH LCFRTLQRFT AATLEHGMHP
710 720 730 740 750
PISPKPEWRA LMDEMAIVAT KEYRSIVFEE PRFVEYFRLA TPEMEYGRMN
760 770 780 790 800
IGSRPSKRKP SAGIESLRAI PWIFAWTQTR FHLPVWLGFG AAFKHVLDKD
810 820 830 840 850
IRNLQTLQEM YNQWPFFRVT IDLVEMVFAK GDPGIAALYD KLLVSEDLWS
860 870 880 890 900
FGKRLRANYE ETKQLLLQVA GHKDLLEGDP YLKQRLRIRD SYITALNVCQ
910 920 930 940 950
AYTLKRIRDP GFQVNPGPHL SKDVMDIGKP ASELVKLNTT SEYAPGLEDT
960
LILTMKGIAA GMQNTG
Length:966
Mass (Da):110,327
Last modified:September 1, 2009 - v1
Checksum:iF69BE7FA4601B32F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000762 Genomic DNA. Translation: EES03641.1.
RefSeqiXP_002458521.1. XM_002458476.1.
UniGeneiSbi.6152.

Genome annotation databases

EnsemblPlantsiSb03g035090.1; Sb03g035090.1; Sb03g035090.
GeneIDi8079221.
KEGGisbi:SORBI_03g035090.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000762 Genomic DNA. Translation: EES03641.1.
RefSeqiXP_002458521.1. XM_002458476.1.
UniGeneiSbi.6152.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4558.Sb03g035090.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiSb03g035090.1; Sb03g035090.1; Sb03g035090.
GeneIDi8079221.
KEGGisbi:SORBI_03g035090.

Organism-specific databases

GrameneiC5XKS5.

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238648.
InParanoidiC5XKS5.
KOiK01595.
OMAiHLSKDIM.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 2 hits.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. BTx623Imported.

Entry informationi

Entry nameiC5XKS5_SORBI
AccessioniPrimary (citable) accession number: C5XKS5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: January 7, 2015
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.