C5XI28 (C5XI28_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb03g012030 EMBL EES02833.1

Gene names

Name:	Sb03g012030 EMBL EES02833.1
ORF Names:	SORBIDRAFT_03g012030 EMBL EES02833.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare)

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	469 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	proteolysis Inferred from electronic annotation. Source: InterPro
Molecular function	metalloendopeptidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5XI28 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: 8148AC7E081DCDDB	FASTA	469	50,612
	10 20 30 40 50 60 MAATLLPTLS PPVSRAAAAF LLRRAPLKPS RYLHPPPTLR RLLSSSSCPA TPPLGLRPVS 70 80 90 100 110 120 TMPSTAAARA VPARRDLLML GIETSCDDTA AAVVRGDGEI LSQVVSSQAD LLARYGGVAP 130 140 150 160 170 180 KMAEEAHALV IDQVVQKALD DAELSESDLS AVAVTIGPGL SLCLRVGVHK ARQVAKAFGL 190 200 210 220 230 240 PIVGVHHMEA HALVSRLVNK DLEFPFLALL ISGGHNLLVL ARGLGQYIQL GTSIDDAIGE 250 260 270 280 290 300 AYDKSARWLG LDMRKGGGPA LEELALEGDP NAVKFKVPMR QHKDCNFSYA GLKTQVRLAI 310 320 330 340 350 360 ESKNLCTEDV PISSASEEDR QLRANIAASF QRVAVLHLEE RCQRAVEWAL KMEPSIKYFV 370 380 390 400 410 420 VSGGVASNKY VRTRLNQVAE NNGLQLVSPP PSLCTDNGVM IAWTGIEHFA VGRFEDPPAA 430 440 450 460 NEPDDKQYEL RPRWPLGEEY SEGRSVARSL KTARVHPSLT SMIQGSLQK

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed: 19189423] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000762 Genomic DNA. Translation: EES02833.1.
RefSeq	XP_002457713.1. XM_002457668.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C5XI28.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb03g012030.1; Sb03g012030.1; Sb03g012030.
GeneID	8078160.
KEGG	sbi:SORBI_03g012030.
Phylogenomic databases
GeneTree	EPGT00050000015850.
OMA	KDCNFSY.
PhylomeDB	C5XI28.
ProtClustDB	CLSN2688940.
Family and domain databases
HAMAP	MF_01445. gcp. [Tree]
InterPro	IPR022450. Pept_M22_O-sialoglycopept. IPR000905. Peptidase_M22. IPR017861. Peptidase_M22_subgr. [Graphical view]
KO	K01409.
Pfam	PF00814. Peptidase_M22. 1 hit. [Graphical view]
PRINTS	PR00789. OSIALOPTASE.
TIGRFAMs	TIGR03723. Bact_gcp. 1 hit. TIGR00329. Gcp_kae1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C5XI28_SORBI

Accession

Primary (citable) accession number: C5XI28

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)