C5XHR7 (C5XHR7_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb03g045450 EMBL EES04193.1

Gene names

Name:	Sb03g045450 EMBL EES04193.1
ORF Names:	SORBIDRAFT_03g045450 EMBL EES04193.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare)

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	336 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 17 family. RuleBase RU004335

Ontologies

Keywords
Molecular function	Glycosidase RuleBase RU004336 Hydrolase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5XHR7 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: 0A8522B92D4D2A70	FASTA	336	35,057
	10 20 30 40 50 60 MLALALLLVA SMLALALLLR AFPATPTGVK SIGVCYGVNG DNLPPASDVV QLYQSNGINL 70 80 90 100 110 120 MRIYFPDTNA LNALSGSNIG VIMDVPNSDL SSLASDPSAA ATWVQRNLQA FPGVNFKYIA 130 140 150 160 170 180 VGNEVSGGDT NSILPAMQNV NSALANAGLG GIKVSTAVES GVTQGFPPSQ GSFSQGYMGP 190 200 210 220 230 240 IAQYLQSTGA PLLCNVYPYF SYTGNEAQIA LSYALFTSPG TVVQDDDGNA YQNLFDALVD 250 260 270 280 290 300 TFVSALENAG AGNVGVVVSE SGWPSDGGDA ATPGNAQTYN QNLINHVGQG TPKRPGAIET 310 320 330 YIFAMFNEDK KTGAETERHF GLFNPDKSPA YPINFS

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed: 19189423] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000762 Genomic DNA. Translation: EES04193.1.
RefSeq	XP_002459073.1. XM_002459028.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb03g045450.1; Sb03g045450.1; Sb03g045450.
GeneID	8081323.
KEGG	sbi:SORBI_03g045450.
Phylogenomic databases
GeneTree	EPGT00050000001245.
OMA	FMATTIL.
PhylomeDB	C5XHR7.
ProtClustDB	CLSN2692280.
Family and domain databases
InterPro	IPR000490. Glyco_hydro_17. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
Pfam	PF00332. Glyco_hydro_17. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00587. GLYCOSYL_HYDROL_F17. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5XHR7_SORBI

Accession

Primary (citable) accession number: C5XHR7

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	December 14, 2011
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)