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Protein

Photosystem II reaction center Psb28 protein

Gene

SORBI_3003G419900

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Keywordsi

Biological processPhotosynthesis

Names & Taxonomyi

Protein namesi
Recommended name:
Photosystem II reaction center Psb28 proteinUniRule annotation
Gene namesi
ORF Names:SORBI_3003G419900Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeSorghinaeSorghum
Proteomesi
  • UP000000768 Componenti: Chromosome 3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Photosystem IIUniRule annotation

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb03g045320.1.

Structurei

3D structure databases

ProteinModelPortaliC5XHQ4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the Psb28 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG410IWN0. Eukaryota.
ENOG4111V3V. LUCA.
HOGENOMiHOG000238646.
InParanoidiC5XHQ4.
KOiK08903.
OMAiAKYIMRS.
OrthoDBiEOG09360Q0R.

Family and domain databases

HAMAPiMF_01370. PSII_Psb28. 1 hit.
InterProiView protein in InterPro
IPR005610. PSII_Psb28_class-1.
PANTHERiPTHR34963. PTHR34963. 1 hit.
PfamiView protein in Pfam
PF03912. Psb28. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD012692. PSII_Psb28_class-1. 1 hit.
TIGRFAMsiTIGR03047. PS_II_psb28. 1 hit.

Sequencei

Sequence statusi: Complete.

C5XHQ4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAVMKALAV ASPVSARAAQ QPRRYVAGGA SQLQSSFHGV SVQCPGRPRQ
60 70 80 90 100
ATPRRGVQVV MMAARPSIQF IQGTDEQTIP DVRLTKSRDG TNGVAIFTFE
110 120 130 140 150
QPSVFDSSAE LGDITGLYMI DDEGVLQSVD VSAKFVNGKP ARIEAKYVMR
160 170
TPRDWDRFMR FMERYSQANG LQFVKN
Length:176
Mass (Da):19,375
Last modified:September 1, 2009 - v1
Checksum:iE265043AD2A2902E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000762 Genomic DNA. Translation: EES02031.1.
RefSeqiXP_002456911.1. XM_002456866.1.

Genome annotation databases

EnsemblPlantsiEES02031; EES02031; SORBI_003G419900.
GeneIDi8081314.
GrameneiEES02031; EES02031; SORBI_003G419900.
KEGGisbi:8081314.

Similar proteinsi

Entry informationi

Entry nameiC5XHQ4_SORBI
AccessioniPrimary (citable) accession number: C5XHQ4
Entry historyiIntegrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: November 22, 2017
This is version 47 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported