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Protein
Submitted name:

Uncharacterized protein

Gene

SORBI_3003G272200

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:SORBI_3003G272200Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeSorghinaeSorghum
Proteomesi
  • UP000000768 Componenti: Chromosome 3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini333 – 382BHLHInterPro annotationAdd BLAST50

Phylogenomic databases

eggNOGiENOG410IKIE. Eukaryota.
ENOG41114N5. LUCA.
HOGENOMiHOG000238207.
InParanoidiC5XHM5.
OMAiGIRTIVM.
OrthoDBiEOG09360526.

Family and domain databases

CDDicd00083. HLH. 1 hit.
Gene3Di4.10.280.10. 1 hit.
InterProiView protein in InterPro
IPR011598. bHLH_dom.
IPR025610. MYC/MYB_N.
PfamiView protein in Pfam
PF14215. bHLH-MYC_N. 1 hit.
PF00010. HLH. 1 hit.
SMARTiView protein in SMART
SM00353. HLH. 1 hit.
SUPFAMiSSF47459. SSF47459. 1 hit.
PROSITEiView protein in PROSITE
PS50888. BHLH. 1 hit.

Sequencei

Sequence statusi: Complete.

C5XHM5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAWSETDAAL FAAVLGRDAA HHLATTPPHL GGPAASASAS APELQARLQD
60 70 80 90 100
LVERGSGAWT YGIFWQESRA GGRAVLGWGD GHCRDASGGG SASASHDDDD
110 120 130 140 150
DAAERSVARK RALLRLHALY GGGDGDDEGA DYALRLDRVT AAEMYFLASM
160 170 180 190 200
YFSFPEGAGG PGHALASGRH AWATVDPHHP RGPGAGAAPA WYVRASLAQS
210 220 230 240 250
AGLRTVVFLP CKGGVLELGS VVPVRETPET VRAIQTALAV APPPAREECM
260 270 280 290 300
RIFGKDLSPS GRTPRSGDNW APQQLGVQAT ASKEAAAARP KAPEPPPRSI
310 320 330 340 350
DFTKPPGKPE QQAGVGEERR PRKRGRKPAN GREEPLNHVE AERQRREKLN
360 370 380 390 400
QRFYALRAVV PKISKMDKAS LLSDAIAYIQ ELEDRLRGGG GCSAARPESP
410 420 430 440 450
AVEVKAMQDE VVLRVTTPLY AHPVSRVFHA IRDAQLSVAA SDVSVADDAV
460 470 480
THTLVLRSAG PEQLTAETVL AAMSRGMTSA TPSP
Length:484
Mass (Da):51,219
Last modified:September 1, 2009 - v1
Checksum:iB8912DBD1E656602
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000762 Genomic DNA. Translation: EES01345.1.
RefSeqiXP_002456225.1. XM_002456180.1.
UniGeneiSbi.20519.

Genome annotation databases

EnsemblPlantsiEES01345; EES01345; SORBI_003G272200.
GeneIDi8059158.
GrameneiEES01345; EES01345; SORBI_003G272200.
KEGGisbi:SORBI_03g032420.

Similar proteinsi

Entry informationi

Entry nameiC5XHM5_SORBI
AccessioniPrimary (citable) accession number: C5XHM5
Entry historyiIntegrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: September 27, 2017
This is version 51 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported