C5XDP9 (C5XDP9_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb02g025790 EMBL EER98972.1

Gene names

Name:	Sb02g025790 EMBL EER98972.1
ORF Names:	SORBIDRAFT_02g025790 EMBL EER98972.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare)

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	509 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the aldehyde dehydrogenase family. RuleBase RU003345

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU003344
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5XDP9 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: CEFBCBDC06C0A871	FASTA	509	54,403
	10 20 30 40 50 60 MGAFAKEEHQ FLAELGLAQR NPGAFVCGAW GGSGPAVTST SPTNNQVIAE VVEASVQDYE 70 80 90 100 110 120 EGMRACFDAA KTWMAFPAPK RGEIVRQIGD ALRAKLHHLG RLVSLEMGKI LPEGIGEVQE 130 140 150 160 170 180 IIDMCDYAVG LSRQLNGSII PSERPNHMMM EVWNPLGVVG VITAFNFPCA VLGWNACIAL 190 200 210 220 230 240 VCGNCVVWKG APTTPLITIA MTKIVASVLE KNNLPGAIFT SFCGGTEIGQ AIAVDTRIPL 250 260 270 280 290 300 VSFTGSTRAG LMVQQQVNAR FGKCLLELSG NNAIIVMDDA DIQLAVRSVL FAAVGTAGQR 310 320 330 340 350 360 CTTCRRLILH ESIYQTFLDQ LVEVYKQVRI GDPLEKGTLL GPLHTPASKE NFLKGVQTIK 370 380 390 400 410 420 SQGGKILFGG SAIESEGNFV QPTIVEITPS AAVVKEELFG PVLYVMKFQS LKEAIEINNS 430 440 450 460 470 480 VPQGLSSSIF TKRPEIIFKW LGPHGSDCGI VNVNIPTNGA EIGGAFGGEK ATGGGREAGS 490 500 DSWKQYMRRA TCTINYGSEL PLAQGINFG

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed: 19189423] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000761 Genomic DNA. Translation: EER98972.1.
RefSeq	XP_002462451.1. XM_002462406.1.
UniGene	Sbi.482.
3D structure databases
ProteinModelPortal	C5XDP9.
ModBase	Search...
Protein-protein interaction databases
STRING	C5XDP9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb02g025790.1; Sb02g025790.1; Sb02g025790.
GeneID	8080995.
KEGG	sbi:SORBI_02g025790.
Phylogenomic databases
OMA	CDYATGL.
PhylomeDB	C5XDP9.
ProtClustDB	PLN02315.
Family and domain databases
InterPro	IPR016161. Ald_DH/histidinol_DH. IPR016163. Ald_DH_C. IPR016160. Ald_DH_CS. IPR016162. Ald_DH_N. IPR015590. Aldehyde_DH_dom. [Graphical view]
Gene3D	G3DSA:3.40.309.10. Aldehyde_dehydrogenase_C. 1 hit. G3DSA:3.40.605.10. Aldehyde_dehydrogenase_N. 1 hit.
KO	K14085.
Pfam	PF00171. Aldedh. 1 hit. [Graphical view]
SUPFAM	SSF53720. Aldehyde_DH/Histidinol_DH. 1 hit.
PROSITE	PS00687. ALDEHYDE_DEHYDR_GLU. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5XDP9_SORBI

Accession

Primary (citable) accession number: C5XDP9

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)