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Protein
Submitted name:

Uncharacterized protein

Gene

SORBI_3002G364900

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:SORBI_3002G364900Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeSorghinaeSorghum
Proteomesi
  • UP000000768 Componenti: Chromosome 2

Subcellular locationi

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb02g038410.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati147 – 182PPRPROSITE-ProRule annotationAdd BLAST36
Repeati183 – 217PPRPROSITE-ProRule annotationAdd BLAST35
Repeati218 – 252PPRPROSITE-ProRule annotationAdd BLAST35
Repeati253 – 287PPRPROSITE-ProRule annotationAdd BLAST35
Repeati376 – 406PPRPROSITE-ProRule annotationAdd BLAST31
Repeati458 – 488PPRPROSITE-ProRule annotationAdd BLAST31
Repeati494 – 528PPRPROSITE-ProRule annotationAdd BLAST35
Repeati529 – 563PPRPROSITE-ProRule annotationAdd BLAST35

Phylogenomic databases

eggNOGiKOG4197. Eukaryota.
ENOG410Z7Z7. LUCA.
HOGENOMiHOG000115668.
InParanoidiC5XD95.
OMAiAYQTFEA.
OrthoDBiEOG093606O3.

Family and domain databases

Gene3Di1.25.40.10. 2 hits.
InterProiView protein in InterPro
IPR002885. Pentatricopeptide_repeat.
IPR011990. TPR-like_helical_dom_sf.
PfamiView protein in Pfam
PF13041. PPR_2. 1 hit.
TIGRFAMsiTIGR00756. PPR. 2 hits.
PROSITEiView protein in PROSITE
PS51375. PPR. 8 hits.

Sequencei

Sequence statusi: Complete.

C5XD95-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAAAAAATS LLLRHNRNPH LLLLRAAISS SRALPQQPEL SPDPTAGAPD
60 70 80 90 100
PAPLPPNPST GSPFYSQNWR NPAAANPPSS LLPTVLAGGA FGAEHRMAAF
110 120 130 140 150
YDTPNAAGLK ETFAKYMAEQ RWEDIKHLFD HWVRSLDATT GKPNHPDVDL
160 170 180 190 200
FNHYLRANLM SGALPHEMLD LADHMREFEL EPNTASYNLV LKSMVAGQES
210 220 230 240 250
EGAEKLIERM LQTGTFPDDE SYNLVVGLLI RQNLVDSSLK YLDLILKSGY
260 270 280 290 300
TLSLTVYTDY IRACMRSGRL DTLTSIIEKC KTTDKNKVLC PQWALCIDIA
310 320 330 340 350
EAAFEANNSK LALFALEFLA KWIARGENVK PPVQLSVNEG LVISALSAAG
360 370 380 390 400
RTFSTDLLNA AWSLLRKSLR QKRAPTPETY LAKIYAHSSI GQLQRAFGTL
410 420 430 440 450
REFENAYGNS EDIDLELFSP FTSLHPLVVA CCKDGFTTLD SVYVQLENLS
460 470 480 490 500
RADPPYKSVS ALNCVILGCA NIWDINRAYE TFVAIKEKFE LTPDIHSYNA
510 520 530 540 550
LLCAFGKLKQ TGEACNVFQH VLTLGVKPNS TTYSLLVDAH LANKDPKAAL
560 570 580 590 600
AIIDEMVDAG FTPSKDTLRK VRRRCSRESD FDSDEKVQSL AKQFNYRLGG
610
ENRREMLYSI EYNPVY
Length:616
Mass (Da):68,292
Last modified:September 1, 2009 - v1
Checksum:i11F2EC6203425BAF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000761 Genomic DNA. Translation: EER97491.1.
RefSeqiXP_002460970.1. XM_002460925.1.

Genome annotation databases

EnsemblPlantsiEER97491; EER97491; SORBI_3002G364900.
GeneIDi8079003.
GrameneiEER97491; EER97491; SORBI_3002G364900.
KEGGisbi:8079003.

Similar proteinsi

Entry informationi

Entry nameiC5XD95_SORBI
AccessioniPrimary (citable) accession number: C5XD95
Entry historyiIntegrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: February 28, 2018
This is version 53 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported