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Protein
Submitted name:

Uncharacterized protein

Gene

SORBI_3002G186800

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:SORBI_3002G186800Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeSorghinaeSorghum
Proteomesi
  • UP000000768 Componenti: Chromosome 2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 35Sequence analysisAdd BLAST35
ChainiPRO_500295612736 – 366Sequence analysisAdd BLAST331

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb02g023470.1.

Structurei

3D structure databases

ProteinModelPortaliC5XBD3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini172 – 259Str_synthInterPro annotationAdd BLAST88

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG1520. Eukaryota.
COG3386. LUCA.
HOGENOMiHOG000223915.
InParanoidiC5XBD3.
OMAiDRRRPGW.
OrthoDBiEOG09360C26.

Family and domain databases

Gene3Di2.120.10.30. 1 hit.
InterProiView protein in InterPro
IPR011042. 6-blade_b-propeller_TolB-like.
IPR018119. Strictosidine_synth_cons-reg.
IPR004141. Strictosidine_synthase.
PANTHERiPTHR10426. PTHR10426. 1 hit.
PfamiView protein in Pfam
PF03088. Str_synth. 1 hit.

Sequencei

Sequence statusi: Complete.

C5XBD3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEPVANAKKC CRPSISTSLQ LLLLLLVQLP SMATCRHKEE MKSIYNVGQR
60 70 80 90 100
VVPVRLGRPA FGPESLAFDH RGDGPYTGVS NGRVLRWRGR RGWTEFAHNY
110 120 130 140 150
KHETEAMCAA KKRAASPAES ACGRPLGLQF HRASGDLYYA DAYLGLMRVG
160 170 180 190 200
RRGGRAEVVA TEAGGATLNF VNGVDVDQET GHVYFTDSSA TYQRSDYIMI
210 220 230 240 250
ILTGEATGRL LRYDPATNST TVLASGLSFP NGVALSADGA HVVVAETTRC
260 270 280 290 300
RLLRHWLRGP ATGTTEPFAD LPGYPDNVRR AADAGAGAGG YHYWVALNRD
310 320 330 340 350
KSWLVNGTTP RSVAAVRVHG ETGAVTEALR GLGNATVSEV VERPGGALWL
360
GSVDTPYVGL LKVDDL
Length:366
Mass (Da):39,386
Last modified:September 1, 2009 - v1
Checksum:i073CB1B283FF549F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000761 Genomic DNA. Translation: EER96672.1.
RefSeqiXP_002460151.1. XM_002460106.1.

Genome annotation databases

EnsemblPlantsiEER96672; EER96672; SORBI_002G186800.
GeneIDi8065382.
GrameneiEER96672; EER96672; SORBI_002G186800.
KEGGisbi:8065382.

Similar proteinsi

Entry informationi

Entry nameiC5XBD3_SORBI
AccessioniPrimary (citable) accession number: C5XBD3
Entry historyiIntegrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: January 31, 2018
This is version 41 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported