C5XAA3 (C5XAA3_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb02g003730 EMBL EER95900.1

Gene names

Name:	Sb02g003730 EMBL EER95900.1
ORF Names:	SORBIDRAFT_02g003730 EMBL EER95900.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare)

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	530 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	prolyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: InterPro proline-tRNA ligase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5XAA3 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: 71B005BF654D3E21	FASTA	530	59,199
	10 20 30 40 50 60 MASLLRLPSL LSPSKGPLLR RRLPAARLAA SAASRGQASA AAETRGGDRE GQVTPRSADF 70 80 90 100 110 120 NAWYTDVIAA AELADYGPVR GTMVIRPYGY AIWEAIQDYL NVKFKETGHS NMYFPQFIPY 130 140 150 160 170 180 SFIEKEASHV EGFSPELALV TIGGGKELEE KLVVRPTSET IVNHMFTKWI HSYRDLPLMI 190 200 210 220 230 240 NQWANVTRWE MRTKPFIRTL EFLWQEGHTA HATLEEAEKE AMQMIDVYTK FAYEHAAIPV 250 260 270 280 290 300 IPGRKSKVET FAGANRTYTI EAMMGDKKAL QAGTSHNLGQ NFSRAFGTQF MDENGQIEHV 310 320 330 340 350 360 WQTSWAISTR FVGGIIMTHG DDAGLMLPPR IAPIQVIIVP IWKKGDEKSA VLEAVDSVQK 370 380 390 400 410 420 ILKEAGIRVK VDDSELRTPG WKFNHYEMKG VPVRIEIGPR DVTNKSVVVS RRDVPGKQGK 430 440 450 460 470 480 EFGVSMEPSI LVNHIKGRLD DIQASLLQKA ITFRDSNIVD VNSYGELKDA ISEGKWARGP 490 500 510 520 530 WSASDADELK VKEETSATIR CYPFEQPEGT KKCFMTGNPA EEVAIFAKSY

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed: 19189423] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000761 Genomic DNA. Translation: EER95900.1.
RefSeq	XP_002459379.1. XM_002459334.1.
UniGene	Sbi.9897.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb02g003730.1; Sb02g003730.1; Sb02g003730.
GeneID	8081162.
KEGG	sbi:SORBI_02g003730.
Phylogenomic databases
GeneTree	EPGT00070000030792.
OMA	KFAEYEL.
PhylomeDB	C5XAA3.
ProtClustDB	CLSN2684117.
Family and domain databases
HAMAP	MF_01571. Pro_tRNA_synth_type3. [Tree]
InterPro	IPR002314. aa-tRNA-synt_IIb_cons-dom. IPR006195. aa-tRNA-synth_II. IPR004154. Anticodon-bd. IPR002316. Pro-tRNA-synth_IIa. IPR004499. Pro-tRNA-synth_IIa_arc-type. IPR017449. Pro-tRNA_synth_II. IPR016061. Pro-tRNA_synth_II_C. [Graphical view]
Gene3D	G3DSA:3.40.50.800. Anticodon_bd. 1 hit. G3DSA:3.30.110.30. Pro-tRNA-synth_II_C_arc/euk. 1 hit.
KO	K01881.
PANTHER	PTHR11451:SF6. ProS_fam_I. 1 hit.
Pfam	PF03129. HGTP_anticodon. 1 hit. PF09180. ProRS-C_1. 1 hit. PF00587. tRNA-synt_2b. 1 hit. [Graphical view]
PRINTS	PR01046. TRNASYNTHPRO.
SMART	SM00946. ProRS-C_1. 1 hit. [Graphical view]
SUPFAM	SSF52954. Anticodon_bd. 1 hit. SSF64586. Pro-tRNA_synth_II_C. 1 hit.
TIGRFAMs	TIGR00408. ProS_fam_I. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5XAA3_SORBI

Accession

Primary (citable) accession number: C5XAA3

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)