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Protein
Submitted name:

Putative uncharacterized protein Sb02g031320

Gene

Sb02g031320

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. RNA polymerase II transcription cofactor activity Source: EnsemblPlants/Gramene
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein Sb02g031320Imported
Gene namesi
Name:Sb02g031320Imported
ORF Names:SORBIDRAFT_02g031320Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
ProteomesiUP000000768 Componenti: Chromosome 2

Organism-specific databases

GrameneiC5X6W5.

Subcellular locationi

GO - Cellular componenti

  1. mediator complex Source: EnsemblPlants/Gramene
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG248582.
HOGENOMiHOG000243278.
InParanoidiC5X6W5.
OMAiDSAILAF.

Family and domain databases

InterProiIPR019258. Mediator_Med4.
[Graphical view]
PfamiPF10018. Med4. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5X6W5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMQSHLPSPA RLGLTASSPS LPPNPVPLNP TSSPPPGSLP SSAAAGASAA
60 70 80 90 100
PTLTTSPSLL PLLPPLPRAQ SLLQLISSLA SNLFELSPNR AAWIQAYRGS
110 120 130 140 150
FPTFLPSASS SAPPLPTPIS STKDALSLLT TLQTQLFEAV AELQETLDLQ
160 170 180 190 200
DARARLAREA RAKDAALVAF AKKLHEAHQV LDRLVDDYAD YRRDPKRPRG
210 220 230 240 250
AAAADDPEPA SEGDFGTSLH SSLKLDDILA YAHRISYTTF APPEHGAGLP
260 270 280 290 300
LRVSLPPVPQ ENQMRASQLY LFADLDVGVP KKPLDAKEGI AAEVEAAPLY
310 320 330 340 350
EPPQEGPSRL PNTLPPMFPK ELKPPPGWKP GDPITLPPDE ILPGIKGEEP
360 370 380 390 400
QAPVPQPHVP VRPVAPMGAE PIQVQPVQLD FDSSSSDEYS SDVGSSEEDD

ED
Length:402
Mass (Da):42,767
Last modified:September 1, 2009 - v1
Checksum:i3D4F58BDC17C0D6A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000761 Genomic DNA. Translation: EER99271.1.
RefSeqiXP_002462750.1. XM_002462705.1.
UniGeneiSbi.550.

Genome annotation databases

EnsemblPlantsiSb02g031320.1; Sb02g031320.1; Sb02g031320.
GeneIDi8067287.
KEGGisbi:SORBI_02g031320.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000761 Genomic DNA. Translation: EER99271.1.
RefSeqiXP_002462750.1. XM_002462705.1.
UniGeneiSbi.550.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiSb02g031320.1; Sb02g031320.1; Sb02g031320.
GeneIDi8067287.
KEGGisbi:SORBI_02g031320.

Organism-specific databases

GrameneiC5X6W5.

Phylogenomic databases

eggNOGiNOG248582.
HOGENOMiHOG000243278.
InParanoidiC5X6W5.
OMAiDSAILAF.

Family and domain databases

InterProiIPR019258. Mediator_Med4.
[Graphical view]
PfamiPF10018. Med4. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. BTx623Imported.

Entry informationi

Entry nameiC5X6W5_SORBI
AccessioniPrimary (citable) accession number: C5X6W5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: January 7, 2015
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.