C5X6V7 (C5X6V7_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb02g031240 EMBL EER99266.1

Gene names

Name:	Sb02g031240 EMBL EER99266.1
ORF Names:	SORBIDRAFT_02g031240 EMBL EER99266.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare)

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	438 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	aromatic amino acid family biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	3-dehydroquinate synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5X6V7 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: D26D947A1E48C489	FASTA	438	47,260
	10 20 30 40 50 60 MAASASSLLA AAASSSCAAI SPRLPRGAPA AASVPSPSRH SCYPLRASPA RRHRSRFVAS 70 80 90 100 110 120 AAPTMQPPAE SRVSTVVDVD LGDRSYPIYI GAGLLDEPDL LQRHVHGKRV LVVTNTTVAP 130 140 150 160 170 180 LYLEKVTWAL THNNPNVSVE SVILPDGEKY KDMDTLMKVF DKAVESRFDR RCTFVALGGG 190 200 210 220 230 240 VIGDMCGFAA AAFLRGVNFI QIPTTLMAQV DSSVGGKTGI NHPLGKNLIG AFYQPQCVLI 250 260 270 280 290 300 DTDTLNTLPD RELASGIAEV VKYGLIRDAP FFEWQEKNML KLLAREPNAL AYAIKRSCEN 310 320 330 340 350 360 KAEVVAQDEK ESGLRATLNL GHTFGHAIET GLGYGAWLHG EAVAAGTVMA ADMSYRLGWI 370 380 390 400 410 420 DESLKNRVVD ILKQAKLPIA PPEAMTVEKF KNIMAVDKKV ADGLLRLILL KGPLGCCVFT 430 GDYDRNALDE TLHAFCDN

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed: 19189423] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000761 Genomic DNA. Translation: EER99266.1.
RefSeq	XP_002462745.1. XM_002462700.1.
UniGene	Sbi.3784.
3D structure databases
ProteinModelPortal	C5X6V7.
ModBase	Search...
Protein-protein interaction databases
STRING	C5X6V7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb02g031240.1; Sb02g031240.1; Sb02g031240.
GeneID	8063321.
KEGG	sbi:SORBI_02g031240.
Phylogenomic databases
GeneTree	EPGT00050000009089.
OMA	VMALEMS.
PhylomeDB	C5X6V7.
ProtClustDB	PLN02834.
Family and domain databases
HAMAP	MF_00110. DHQ_synthase. [Tree]
InterPro	IPR016037. DHQ_synth_AroB. [Graphical view]
KO	K01735.
TIGRFAMs	TIGR01357. AroB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C5X6V7_SORBI

Accession

Primary (citable) accession number: C5X6V7

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	December 14, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)