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C5X600

- C5X600_SORBI

UniProt

C5X600 - C5X600_SORBI

Protein
Submitted name:

Putative uncharacterized protein Sb02g012320

Gene

Sb02g012320

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 31 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. beta-amylase activity Source: InterPro

    GO - Biological processi

    1. polysaccharide catabolic process Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized protein Sb02g012320Imported
    Gene namesi
    Name:Sb02g012320Imported
    ORF Names:SORBIDRAFT_02g012320Imported
    OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
    Taxonomic identifieri4558 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
    ProteomesiUP000000768: Chromosome 2

    Organism-specific databases

    GrameneiC5X600.

    Interactioni

    Protein-protein interaction databases

    STRINGi4558.Sb02g012320.1.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 14 family.UniRule annotation

    Phylogenomic databases

    eggNOGiNOG274372.
    HOGENOMiHOG000238755.
    KOiK01177.
    OMAiAGHYNSE.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR001554. Glyco_hydro_14.
    IPR018238. Glyco_hydro_14_CS.
    IPR001371. Glyco_hydro_14B_pln.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PfamiPF01373. Glyco_hydro_14. 1 hit.
    [Graphical view]
    PRINTSiPR00750. BETAAMYLASE.
    PR00842. GLHYDLASE14B.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    PROSITEiPS00506. BETA_AMYLASE_1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C5X600-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDPAAEDGPV AKQVPDVAPR PPERDFAGTP YVPVYVMLPL GVVNGNGEVV    50
    DADELVGQLR VLKAAGVDGV MVDCWWGNVE AHRPQEYNWT GYRRLFQMIR 100
    ELKLKLQVVM SFHECGGNVG DDISIPLPHW VIEIGRSNPD IYFTDRAGRR 150
    NTECLSWGID KERVLQGRTA VEVYFDFMRS FRVEFDEYFE DGIISEIEIG 200
    LGACGELRYP SYPAKHGWKY PGIGEFQCYD RYLQKSLRKA AEARGHTIWA 250
    RGPDNAGHYN SEPNLTGFFC DGGDYDSYYG RFFLSWYSQT LVDHADRVLM 300
    LARLAFEGSN IAVKVSGVHW WYKTASHAAE LTAGFYNPCN RDGYAPIAAV 350
    LKKYDAALNF TCVELRTMDQ HEVYPEAFAD PEGLVWQVLN AAWDAGIQVA 400
    SENALPCYDR DGFNKILENA KPLNDPDGRH LFGFTYLRLS NVLFERPNFF 450
    EFERFVKRMH GEAVLDLQV 469
    Length:469
    Mass (Da):53,242
    Last modified:September 1, 2009 - v1
    Checksum:iFCF15366C74F93F2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000761 Genomic DNA. Translation: EER96370.1.
    RefSeqiXP_002459849.1. XM_002459804.1.
    UniGeneiSbi.16154.

    Genome annotation databases

    EnsemblPlantsiSb02g012320.1; Sb02g012320.1; Sb02g012320.
    GeneIDi8062554.
    KEGGisbi:SORBI_02g012320.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000761 Genomic DNA. Translation: EER96370.1 .
    RefSeqi XP_002459849.1. XM_002459804.1.
    UniGenei Sbi.16154.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 4558.Sb02g012320.1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi Sb02g012320.1 ; Sb02g012320.1 ; Sb02g012320 .
    GeneIDi 8062554.
    KEGGi sbi:SORBI_02g012320.

    Organism-specific databases

    Gramenei C5X600.

    Phylogenomic databases

    eggNOGi NOG274372.
    HOGENOMi HOG000238755.
    KOi K01177.
    OMAi AGHYNSE.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR001554. Glyco_hydro_14.
    IPR018238. Glyco_hydro_14_CS.
    IPR001371. Glyco_hydro_14B_pln.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    Pfami PF01373. Glyco_hydro_14. 1 hit.
    [Graphical view ]
    PRINTSi PR00750. BETAAMYLASE.
    PR00842. GLHYDLASE14B.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    PROSITEi PS00506. BETA_AMYLASE_1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. BTx623Imported.

    Entry informationi

    Entry nameiC5X600_SORBI
    AccessioniPrimary (citable) accession number: C5X600
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 31 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3