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Protein
Submitted name:

Putative uncharacterized protein Sb02g012320

Gene

Sb02g012320

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. beta-amylase activity Source: InterPro

GO - Biological processi

  1. polysaccharide catabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein Sb02g012320Imported
Gene namesi
Name:Sb02g012320Imported
ORF Names:SORBIDRAFT_02g012320Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
ProteomesiUP000000768: Chromosome 2

Organism-specific databases

GrameneiC5X600.

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb02g012320.1.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 14 family.UniRule annotation

Phylogenomic databases

eggNOGiNOG274372.
HOGENOMiHOG000238755.
InParanoidiC5X600.
KOiK01177.
OMAiRDGFNKI.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001554. Glyco_hydro_14.
IPR018238. Glyco_hydro_14_CS.
IPR001371. Glyco_hydro_14B_pln.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF01373. Glyco_hydro_14. 1 hit.
[Graphical view]
PRINTSiPR00750. BETAAMYLASE.
PR00842. GLHYDLASE14B.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00506. BETA_AMYLASE_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5X600-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDPAAEDGPV AKQVPDVAPR PPERDFAGTP YVPVYVMLPL GVVNGNGEVV
60 70 80 90 100
DADELVGQLR VLKAAGVDGV MVDCWWGNVE AHRPQEYNWT GYRRLFQMIR
110 120 130 140 150
ELKLKLQVVM SFHECGGNVG DDISIPLPHW VIEIGRSNPD IYFTDRAGRR
160 170 180 190 200
NTECLSWGID KERVLQGRTA VEVYFDFMRS FRVEFDEYFE DGIISEIEIG
210 220 230 240 250
LGACGELRYP SYPAKHGWKY PGIGEFQCYD RYLQKSLRKA AEARGHTIWA
260 270 280 290 300
RGPDNAGHYN SEPNLTGFFC DGGDYDSYYG RFFLSWYSQT LVDHADRVLM
310 320 330 340 350
LARLAFEGSN IAVKVSGVHW WYKTASHAAE LTAGFYNPCN RDGYAPIAAV
360 370 380 390 400
LKKYDAALNF TCVELRTMDQ HEVYPEAFAD PEGLVWQVLN AAWDAGIQVA
410 420 430 440 450
SENALPCYDR DGFNKILENA KPLNDPDGRH LFGFTYLRLS NVLFERPNFF
460
EFERFVKRMH GEAVLDLQV
Length:469
Mass (Da):53,242
Last modified:September 1, 2009 - v1
Checksum:iFCF15366C74F93F2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000761 Genomic DNA. Translation: EER96370.1.
RefSeqiXP_002459849.1. XM_002459804.1.
UniGeneiSbi.16154.

Genome annotation databases

EnsemblPlantsiSb02g012320.1; Sb02g012320.1; Sb02g012320.
GeneIDi8062554.
KEGGisbi:SORBI_02g012320.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000761 Genomic DNA. Translation: EER96370.1.
RefSeqiXP_002459849.1. XM_002459804.1.
UniGeneiSbi.16154.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4558.Sb02g012320.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiSb02g012320.1; Sb02g012320.1; Sb02g012320.
GeneIDi8062554.
KEGGisbi:SORBI_02g012320.

Organism-specific databases

GrameneiC5X600.

Phylogenomic databases

eggNOGiNOG274372.
HOGENOMiHOG000238755.
InParanoidiC5X600.
KOiK01177.
OMAiRDGFNKI.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001554. Glyco_hydro_14.
IPR018238. Glyco_hydro_14_CS.
IPR001371. Glyco_hydro_14B_pln.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF01373. Glyco_hydro_14. 1 hit.
[Graphical view]
PRINTSiPR00750. BETAAMYLASE.
PR00842. GLHYDLASE14B.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00506. BETA_AMYLASE_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. BTx623Imported.

Entry informationi

Entry nameiC5X600_SORBI
AccessioniPrimary (citable) accession number: C5X600
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: January 7, 2015
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.