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C5X600 (C5X600_SORBI) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Sb02g012320 EMBL EER96370.1
ORF Names:SORBIDRAFT_02g012320 EMBL EER96370.1
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare) [Reference proteome]
Taxonomic identifier4558 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum

Protein attributes

Sequence length469 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 14 family. RuleBase RU004157

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processpolysaccharide catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-amylase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C5X600 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: FCF15366C74F93F2

FASTA46953,242
        10         20         30         40         50         60 
MDPAAEDGPV AKQVPDVAPR PPERDFAGTP YVPVYVMLPL GVVNGNGEVV DADELVGQLR 

        70         80         90        100        110        120 
VLKAAGVDGV MVDCWWGNVE AHRPQEYNWT GYRRLFQMIR ELKLKLQVVM SFHECGGNVG 

       130        140        150        160        170        180 
DDISIPLPHW VIEIGRSNPD IYFTDRAGRR NTECLSWGID KERVLQGRTA VEVYFDFMRS 

       190        200        210        220        230        240 
FRVEFDEYFE DGIISEIEIG LGACGELRYP SYPAKHGWKY PGIGEFQCYD RYLQKSLRKA 

       250        260        270        280        290        300 
AEARGHTIWA RGPDNAGHYN SEPNLTGFFC DGGDYDSYYG RFFLSWYSQT LVDHADRVLM 

       310        320        330        340        350        360 
LARLAFEGSN IAVKVSGVHW WYKTASHAAE LTAGFYNPCN RDGYAPIAAV LKKYDAALNF 

       370        380        390        400        410        420 
TCVELRTMDQ HEVYPEAFAD PEGLVWQVLN AAWDAGIQVA SENALPCYDR DGFNKILENA 

       430        440        450        460 
KPLNDPDGRH LFGFTYLRLS NVLFERPNFF EFERFVKRMH GEAVLDLQV 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000761 Genomic DNA. Translation: EER96370.1.
RefSeqXP_002459849.1. XM_002459804.1.
UniGeneSbi.16154.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING4558.Sb02g012320.1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsSb02g012320.1; Sb02g012320.1; Sb02g012320.
GeneID8062554.
KEGGsbi:SORBI_02g012320.

Organism-specific databases

GrameneC5X600.

Phylogenomic databases

eggNOGNOG274372.
HOGENOMHOG000238755.
KOK01177.
OMAAGHYNSE.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001554. Glyco_hydro_14.
IPR018238. Glyco_hydro_14_CS.
IPR001371. Glyco_hydro_14B_pln.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF01373. Glyco_hydro_14. 1 hit.
[Graphical view]
PRINTSPR00750. BETAAMYLASE.
PR00842. GLHYDLASE14B.
SUPFAMSSF51445. SSF51445. 1 hit.
PROSITEPS00506. BETA_AMYLASE_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5X600_SORBI
AccessionPrimary (citable) accession number: C5X600
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)