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C5X600

- C5X600_SORBI

UniProt

C5X600 - C5X600_SORBI

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Protein
Submitted name:

Putative uncharacterized protein Sb02g012320

Gene
Sb02g012320, SORBIDRAFT_02g012320
Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. beta-amylase activity Source: InterPro

GO - Biological processi

  1. polysaccharide catabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein Sb02g012320Imported
Gene namesi
Name:Sb02g012320Imported
ORF Names:SORBIDRAFT_02g012320Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
ProteomesiUP000000768: Chromosome 2

Organism-specific databases

GrameneiC5X600.

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb02g012320.1.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 14 family.UniRule annotation

Phylogenomic databases

eggNOGiNOG274372.
HOGENOMiHOG000238755.
KOiK01177.
OMAiAGHYNSE.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001554. Glyco_hydro_14.
IPR018238. Glyco_hydro_14_CS.
IPR001371. Glyco_hydro_14B_pln.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF01373. Glyco_hydro_14. 1 hit.
[Graphical view]
PRINTSiPR00750. BETAAMYLASE.
PR00842. GLHYDLASE14B.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00506. BETA_AMYLASE_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5X600-1 [UniParc]FASTAAdd to Basket

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MDPAAEDGPV AKQVPDVAPR PPERDFAGTP YVPVYVMLPL GVVNGNGEVV    50
DADELVGQLR VLKAAGVDGV MVDCWWGNVE AHRPQEYNWT GYRRLFQMIR 100
ELKLKLQVVM SFHECGGNVG DDISIPLPHW VIEIGRSNPD IYFTDRAGRR 150
NTECLSWGID KERVLQGRTA VEVYFDFMRS FRVEFDEYFE DGIISEIEIG 200
LGACGELRYP SYPAKHGWKY PGIGEFQCYD RYLQKSLRKA AEARGHTIWA 250
RGPDNAGHYN SEPNLTGFFC DGGDYDSYYG RFFLSWYSQT LVDHADRVLM 300
LARLAFEGSN IAVKVSGVHW WYKTASHAAE LTAGFYNPCN RDGYAPIAAV 350
LKKYDAALNF TCVELRTMDQ HEVYPEAFAD PEGLVWQVLN AAWDAGIQVA 400
SENALPCYDR DGFNKILENA KPLNDPDGRH LFGFTYLRLS NVLFERPNFF 450
EFERFVKRMH GEAVLDLQV 469
Length:469
Mass (Da):53,242
Last modified:September 1, 2009 - v1
Checksum:iFCF15366C74F93F2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000761 Genomic DNA. Translation: EER96370.1.
RefSeqiXP_002459849.1. XM_002459804.1.
UniGeneiSbi.16154.

Genome annotation databases

EnsemblPlantsiSb02g012320.1; Sb02g012320.1; Sb02g012320.
GeneIDi8062554.
KEGGisbi:SORBI_02g012320.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000761 Genomic DNA. Translation: EER96370.1 .
RefSeqi XP_002459849.1. XM_002459804.1.
UniGenei Sbi.16154.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 4558.Sb02g012320.1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi Sb02g012320.1 ; Sb02g012320.1 ; Sb02g012320 .
GeneIDi 8062554.
KEGGi sbi:SORBI_02g012320.

Organism-specific databases

Gramenei C5X600.

Phylogenomic databases

eggNOGi NOG274372.
HOGENOMi HOG000238755.
KOi K01177.
OMAi AGHYNSE.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001554. Glyco_hydro_14.
IPR018238. Glyco_hydro_14_CS.
IPR001371. Glyco_hydro_14B_pln.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
Pfami PF01373. Glyco_hydro_14. 1 hit.
[Graphical view ]
PRINTSi PR00750. BETAAMYLASE.
PR00842. GLHYDLASE14B.
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00506. BETA_AMYLASE_1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. BTx623.

Entry informationi

Entry nameiC5X600_SORBI
AccessioniPrimary (citable) accession number: C5X600
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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