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Protein
Submitted name:

Uncharacterized protein

Gene

SORBI_002G234300

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:SORBI_002G234300Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeSorghinaeSorghum
Proteomesi
  • UP000000768 Componenti: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb02g027340.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini73 – 395SAM_MT_RSMB_NOPInterPro annotationAdd BLAST323

Phylogenomic databases

eggNOGiKOG2198. Eukaryota.
COG0144. LUCA.
HOGENOMiHOG000205147.
InParanoidiC5X327.
KOiK15334.
OMAiTEVSDEH.
OrthoDBiEOG093601IA.

Family and domain databases

Gene3Di3.40.50.150. 2 hits.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR001678. MeTrfase_RsmB/NOP2.
IPR023267. RCMT.
IPR023270. RCMT_NCL1.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
PR02011. RCMTNCL1.
SUPFAMiSSF53335. SSF53335. 2 hits.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5X327-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGGGRKRGRT QRRHFKQGRE NVWKHNPQRP PAGEGGEGRE GNPSWQPFAT
60 70 80 90 100
ENPSFEEYYK EQQIVPEEEW DSFMSMLRKP LPATFRINAS CQFYQDICSQ
110 120 130 140 150
LENDFRKSLE TEVTDEHEED AIRPLPWYPG NLAWHLNFSR MQLRRNQALE
160 170 180 190 200
SFHEFLKREN EVGNITRQEA VSMVPPLFLN VQPDHHILDM CAAPGSKTFQ
210 220 230 240 250
LLEMIHQSTK PGVLPNALVV ANDVDVQRCN LLIHQTKRMC TANLIVTNHE
260 270 280 290 300
AQNFPGCNLA KFCSEVCMDE AKLQRLEFDR VLCDVPCSGD GTVRKAPDMW
310 320 330 340 350
RKWNAGMGNG LHRLQVEIAM RGMGLLKVGG RMVYSTCSMN PVENEAVVAE
360 370 380 390 400
ILRRCGDSVE LLDVSNELPE LARRPGLSTW KVRDRGSWFG VHEDVPRYRK
410 420 430 440 450
HVISPSMFPS GKGSKDSLTV SSSVEVNTDV ADADMKDSTD IGEGEQETNI
460 470 480 490 500
TIDDSDNADN LKTKEGTKVD CEFGEVTASS YKKSNSTPIR TEHSDYPLHR
510 520 530 540 550
CMRIVAHDQN SGAFFIAVLH KLSPLNENQV IDGVKGEQNI SKDKTEKLEK
560 570 580 590 600
DLGSDKASSE ENIVHHEVID NTNVLDGEQN EDRDNKSSKD KSSEDSKVNV
610 620 630 640 650
NEAEKGQAGT RDRRRQQNQG RWRGVDPVIF FKDEATVKSI VSFYGIMDSF
660 670 680 690 700
PLEGHLVTRN PDASHVKRIY YVSKSVQDAL QLNIKVGERL KITSLGLKIF
710 720 730 740 750
ERQSSKEGSP CTFRLSSEGL PLLLPYITKQ ILYASAIDFQ HLLQYRTIKF
760 770 780 790 800
PDFVDAKFGE EASALLPGCC VVVLREGHQD IGSIATDPSA IAIVCWKGKT
810 820 830 840 850
NLCVMVSPLD GKELLERISL RFGLKIPKGD KEKPSEEIAG SDELLDCATE
860 870
VDDQECFPES KASDIEISDA KDAD
Length:874
Mass (Da):98,193
Last modified:September 1, 2009 - v1
Checksum:i7250913C2FBD8C3D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000761 Genomic DNA. Translation: EER96904.1.
RefSeqiXP_002460383.1. XM_002460338.1.
UniGeneiSbi.1933.

Genome annotation databases

EnsemblPlantsiSb02g027340.1; Sb02g027340.1; Sb02g027340.
GeneIDi8063738.
GrameneiSb02g027340.1; Sb02g027340.1; Sb02g027340.
KEGGisbi:SORBI_02g027340.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000761 Genomic DNA. Translation: EER96904.1.
RefSeqiXP_002460383.1. XM_002460338.1.
UniGeneiSbi.1933.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4558.Sb02g027340.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiSb02g027340.1; Sb02g027340.1; Sb02g027340.
GeneIDi8063738.
GrameneiSb02g027340.1; Sb02g027340.1; Sb02g027340.
KEGGisbi:SORBI_02g027340.

Phylogenomic databases

eggNOGiKOG2198. Eukaryota.
COG0144. LUCA.
HOGENOMiHOG000205147.
InParanoidiC5X327.
KOiK15334.
OMAiTEVSDEH.
OrthoDBiEOG093601IA.

Family and domain databases

Gene3Di3.40.50.150. 2 hits.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR001678. MeTrfase_RsmB/NOP2.
IPR023267. RCMT.
IPR023270. RCMT_NCL1.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
PR02011. RCMTNCL1.
SUPFAMiSSF53335. SSF53335. 2 hits.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiC5X327_SORBI
AccessioniPrimary (citable) accession number: C5X327
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: November 2, 2016
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.