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Protein
Submitted name:

Uncharacterized protein

Gene

SORBI_3001G077900

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:SORBI_3001G077900Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeSorghinaeSorghum
Proteomesi
  • UP000000768 Componenti: Chromosome 1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei39 – 59HelicalSequence analysisAdd BLAST21
Transmembranei71 – 92HelicalSequence analysisAdd BLAST22
Transmembranei168 – 190HelicalSequence analysisAdd BLAST23
Transmembranei202 – 220HelicalSequence analysisAdd BLAST19

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb01g007040.1.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3236. Eukaryota.
ENOG41101UF. LUCA.
HOGENOMiHOG000005667.
InParanoidiC5WZ99.
OMAiEYNAFWR.
OrthoDBiEOG09360K8L.

Family and domain databases

InterProiView protein in InterPro
IPR019164. TMEM147.
PANTHERiPTHR12869. PTHR12869. 1 hit.
PfamiView protein in Pfam
PF09767. DUF2053. 1 hit.

Sequencei

Sequence statusi: Complete.

C5WZ99-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTVFHFLNCA FLTFGPHVVY YSATPLSEYD TIGTSVKAAA VYLGTALVKL
60 70 80 90 100
VCLATLLKVP ENDSFDPYQE LMKVFIGFID VAGLYFALTQ LTHRNISQNH
110 120 130 140 150
KFQAVGLGWA FADSVLHRLA PLWIGARGLE FTWEYIFQGL EANANLVMTL
160 170 180 190 200
SLAALGSLMW LRKNKPRTLI PIIYACALLL ATMPSITSYL RRSLEWQTPK
210 220
VVGFELFSSL VMAFISWQLF SACQRPM
Length:227
Mass (Da):25,474
Last modified:September 1, 2009 - v1
Checksum:i197D4B9062B0461D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000760 Genomic DNA. Translation: EER90828.1.
RefSeqiXP_002463830.1. XM_002463785.1.
UniGeneiSbi.8591.

Genome annotation databases

EnsemblPlantsiEER90828; EER90828; SORBI_001G077900.
GeneIDi8086187.
GrameneiEER90828; EER90828; SORBI_001G077900.
KEGGisbi:8086187.

Similar proteinsi

Entry informationi

Entry nameiC5WZ99_SORBI
AccessioniPrimary (citable) accession number: C5WZ99
Entry historyiIntegrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: October 25, 2017
This is version 40 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported