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C5WYV3

- C5WYV3_SORBI

UniProt

C5WYV3 - C5WYV3_SORBI

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Protein

Beta-amylase

Gene

Sb01g047500

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Hydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive maltose units from the non-reducing ends of the chains.

GO - Molecular functioni

  1. beta-amylase activity Source: UniProtKB-EC

GO - Biological processi

  1. polysaccharide catabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-amylaseUniRule annotation (EC:3.2.1.2UniRule annotation)
Gene namesi
Name:Sb01g047500Imported
ORF Names:SORBIDRAFT_01g047500Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
ProteomesiUP000000768: Chromosome 1

Organism-specific databases

GrameneiC5WYV3.

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb01g047500.1.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 14 family.UniRule annotation

Phylogenomic databases

eggNOGiNOG77898.
HOGENOMiHOG000238755.
InParanoidiC5WYV3.
KOiK01177.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001554. Glyco_hydro_14.
IPR018238. Glyco_hydro_14_CS.
IPR001371. Glyco_hydro_14B_pln.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF01373. Glyco_hydro_14. 1 hit.
[Graphical view]
PRINTSiPR00750. BETAAMYLASE.
PR00842. GLHYDLASE14B.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00506. BETA_AMYLASE_1. 1 hit.
PS00679. BETA_AMYLASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5WYV3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MMALNLAHQT GAAVTAAPTA PRSAVVAAAA TVSAPSASAS AAPAPALQMQ
60 70 80 90 100
TMTVDAAPAQ APDAVKPDLA MACQALVEGS TPDEAQHADV AAELKTKAGV
110 120 130 140 150
PVFVMMPLDT VRKDGNSLNR RKAVEASLAA LKSAGVEGIM VDVWWGIAEA
160 170 180 190 200
DGPGQYNFNG YMELMEMARK TGLKVQAVMS FHQCGGNVGD SVTIPLPRWV
210 220 230 240 250
VEEMDKDQDL AYTDRSGRRN YEYVSLGCDT LPVLKGRTPI QCYADFMRAF
260 270 280 290 300
RDHFATFMGN TIVEIQVGMG PAGELRYPSY PESDGTWSFP GIGEFQCYDR
310 320 330 340 350
YMLSSLKAAA ESVGKPEWGN GGPGDAGGYK NWPEDTGFFR REGGWSNEYG
360 370 380 390 400
QFFMSWYSQM LLEHGERILS AATGVYTGSP GVKISVKVAG IHWHYGTRSH
410 420 430 440 450
AAELTAGYYN TRHHDGYAPI ARMLARHGAV LNFTCVEMRD HEQPQDAQCR
460 470 480 490 500
PEALVQQVAA AAREAGVGLA GENALPRYDE TAHDQVVATA ADRAAEDRMV
510 520 530 540 550
AFTYLRMGPD LFQPDNWRRF AAFVKRMSQP GARDACREQV EREADGVAHA
560
TQPLVHEAAV ALTN
Length:564
Mass (Da):60,984
Last modified:September 1, 2009 - v1
Checksum:i8368513009B5ECD1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000760 Genomic DNA. Translation: EER95531.1.
RefSeqiXP_002468533.1. XM_002468488.1.
UniGeneiSbi.208.

Genome annotation databases

EnsemblPlantsiSb01g047500.1; Sb01g047500.1; Sb01g047500.
GeneIDi8080586.
KEGGisbi:SORBI_01g047500.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000760 Genomic DNA. Translation: EER95531.1 .
RefSeqi XP_002468533.1. XM_002468488.1.
UniGenei Sbi.208.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 4558.Sb01g047500.1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi Sb01g047500.1 ; Sb01g047500.1 ; Sb01g047500 .
GeneIDi 8080586.
KEGGi sbi:SORBI_01g047500.

Organism-specific databases

Gramenei C5WYV3.

Phylogenomic databases

eggNOGi NOG77898.
HOGENOMi HOG000238755.
InParanoidi C5WYV3.
KOi K01177.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001554. Glyco_hydro_14.
IPR018238. Glyco_hydro_14_CS.
IPR001371. Glyco_hydro_14B_pln.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
Pfami PF01373. Glyco_hydro_14. 1 hit.
[Graphical view ]
PRINTSi PR00750. BETAAMYLASE.
PR00842. GLHYDLASE14B.
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00506. BETA_AMYLASE_1. 1 hit.
PS00679. BETA_AMYLASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. BTx623Imported.

Entry informationi

Entry nameiC5WYV3_SORBI
AccessioniPrimary (citable) accession number: C5WYV3
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: October 29, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3