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C5WYV3 (C5WYV3_SORBI) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Beta-amylase RuleBase RU000509

EC=3.2.1.2 RuleBase RU000509
Gene names
Name:Sb01g047500 EMBL EER95531.1
ORF Names:SORBIDRAFT_01g047500 EMBL EER95531.1
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare) [Reference proteome]
Taxonomic identifier4558 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum

Protein attributes

Sequence length564 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive maltose units from the non-reducing ends of the chains. RuleBase RU000509

Sequence similarities

Belongs to the glycosyl hydrolase 14 family.

Ontologies

Sequences

Sequence LengthMass (Da)Tools
C5WYV3 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 8368513009B5ECD1

FASTA56460,984
        10         20         30         40         50         60 
MMALNLAHQT GAAVTAAPTA PRSAVVAAAA TVSAPSASAS AAPAPALQMQ TMTVDAAPAQ 

        70         80         90        100        110        120 
APDAVKPDLA MACQALVEGS TPDEAQHADV AAELKTKAGV PVFVMMPLDT VRKDGNSLNR 

       130        140        150        160        170        180 
RKAVEASLAA LKSAGVEGIM VDVWWGIAEA DGPGQYNFNG YMELMEMARK TGLKVQAVMS 

       190        200        210        220        230        240 
FHQCGGNVGD SVTIPLPRWV VEEMDKDQDL AYTDRSGRRN YEYVSLGCDT LPVLKGRTPI 

       250        260        270        280        290        300 
QCYADFMRAF RDHFATFMGN TIVEIQVGMG PAGELRYPSY PESDGTWSFP GIGEFQCYDR 

       310        320        330        340        350        360 
YMLSSLKAAA ESVGKPEWGN GGPGDAGGYK NWPEDTGFFR REGGWSNEYG QFFMSWYSQM 

       370        380        390        400        410        420 
LLEHGERILS AATGVYTGSP GVKISVKVAG IHWHYGTRSH AAELTAGYYN TRHHDGYAPI 

       430        440        450        460        470        480 
ARMLARHGAV LNFTCVEMRD HEQPQDAQCR PEALVQQVAA AAREAGVGLA GENALPRYDE 

       490        500        510        520        530        540 
TAHDQVVATA ADRAAEDRMV AFTYLRMGPD LFQPDNWRRF AAFVKRMSQP GARDACREQV 

       550        560 
EREADGVAHA TQPLVHEAAV ALTN 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000760 Genomic DNA. Translation: EER95531.1.
RefSeqXP_002468533.1. XM_002468488.1.
UniGeneSbi.208.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING4558.Sb01g047500.1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsSb01g047500.1; Sb01g047500.1; Sb01g047500.
GeneID8080586.
KEGGsbi:SORBI_01g047500.

Organism-specific databases

GrameneC5WYV3.

Phylogenomic databases

eggNOGNOG77898.
HOGENOMHOG000238755.
KOK01177.
ProtClustDBCLSN2693506.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001554. Glyco_hydro_14.
IPR018238. Glyco_hydro_14_CS.
IPR001371. Glyco_hydro_14B_pln.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF01373. Glyco_hydro_14. 1 hit.
[Graphical view]
PRINTSPR00750. BETAAMYLASE.
PR00842. GLHYDLASE14B.
SUPFAMSSF51445. SSF51445. 1 hit.
PROSITEPS00506. BETA_AMYLASE_1. 1 hit.
PS00679. BETA_AMYLASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5WYV3_SORBI
AccessionPrimary (citable) accession number: C5WYV3
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: March 19, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)