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C5WYV3

- C5WYV3_SORBI

UniProt

C5WYV3 - C5WYV3_SORBI

Protein

Beta-amylase

Gene

Sb01g047500

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 31 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive maltose units from the non-reducing ends of the chains.UniRule annotation

    GO - Molecular functioni

    1. beta-amylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. polysaccharide catabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolism, Polysaccharide degradationUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-amylaseUniRule annotation (EC:3.2.1.2UniRule annotation)
    Gene namesi
    Name:Sb01g047500Imported
    ORF Names:SORBIDRAFT_01g047500Imported
    OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
    Taxonomic identifieri4558 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
    ProteomesiUP000000768: Chromosome 1

    Organism-specific databases

    GrameneiC5WYV3.

    Interactioni

    Protein-protein interaction databases

    STRINGi4558.Sb01g047500.1.

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiNOG77898.
    HOGENOMiHOG000238755.
    KOiK01177.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR001554. Glyco_hydro_14.
    IPR018238. Glyco_hydro_14_CS.
    IPR001371. Glyco_hydro_14B_pln.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PfamiPF01373. Glyco_hydro_14. 1 hit.
    [Graphical view]
    PRINTSiPR00750. BETAAMYLASE.
    PR00842. GLHYDLASE14B.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    PROSITEiPS00506. BETA_AMYLASE_1. 1 hit.
    PS00679. BETA_AMYLASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C5WYV3-1 [UniParc]FASTAAdd to Basket

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    MMALNLAHQT GAAVTAAPTA PRSAVVAAAA TVSAPSASAS AAPAPALQMQ    50
    TMTVDAAPAQ APDAVKPDLA MACQALVEGS TPDEAQHADV AAELKTKAGV 100
    PVFVMMPLDT VRKDGNSLNR RKAVEASLAA LKSAGVEGIM VDVWWGIAEA 150
    DGPGQYNFNG YMELMEMARK TGLKVQAVMS FHQCGGNVGD SVTIPLPRWV 200
    VEEMDKDQDL AYTDRSGRRN YEYVSLGCDT LPVLKGRTPI QCYADFMRAF 250
    RDHFATFMGN TIVEIQVGMG PAGELRYPSY PESDGTWSFP GIGEFQCYDR 300
    YMLSSLKAAA ESVGKPEWGN GGPGDAGGYK NWPEDTGFFR REGGWSNEYG 350
    QFFMSWYSQM LLEHGERILS AATGVYTGSP GVKISVKVAG IHWHYGTRSH 400
    AAELTAGYYN TRHHDGYAPI ARMLARHGAV LNFTCVEMRD HEQPQDAQCR 450
    PEALVQQVAA AAREAGVGLA GENALPRYDE TAHDQVVATA ADRAAEDRMV 500
    AFTYLRMGPD LFQPDNWRRF AAFVKRMSQP GARDACREQV EREADGVAHA 550
    TQPLVHEAAV ALTN 564
    Length:564
    Mass (Da):60,984
    Last modified:September 1, 2009 - v1
    Checksum:i8368513009B5ECD1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000760 Genomic DNA. Translation: EER95531.1.
    RefSeqiXP_002468533.1. XM_002468488.1.
    UniGeneiSbi.208.

    Genome annotation databases

    EnsemblPlantsiSb01g047500.1; Sb01g047500.1; Sb01g047500.
    GeneIDi8080586.
    KEGGisbi:SORBI_01g047500.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000760 Genomic DNA. Translation: EER95531.1 .
    RefSeqi XP_002468533.1. XM_002468488.1.
    UniGenei Sbi.208.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 4558.Sb01g047500.1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi Sb01g047500.1 ; Sb01g047500.1 ; Sb01g047500 .
    GeneIDi 8080586.
    KEGGi sbi:SORBI_01g047500.

    Organism-specific databases

    Gramenei C5WYV3.

    Phylogenomic databases

    eggNOGi NOG77898.
    HOGENOMi HOG000238755.
    KOi K01177.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR001554. Glyco_hydro_14.
    IPR018238. Glyco_hydro_14_CS.
    IPR001371. Glyco_hydro_14B_pln.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    Pfami PF01373. Glyco_hydro_14. 1 hit.
    [Graphical view ]
    PRINTSi PR00750. BETAAMYLASE.
    PR00842. GLHYDLASE14B.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    PROSITEi PS00506. BETA_AMYLASE_1. 1 hit.
    PS00679. BETA_AMYLASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. BTx623Imported.

    Entry informationi

    Entry nameiC5WYV3_SORBI
    AccessioniPrimary (citable) accession number: C5WYV3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 31 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3