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Protein
Submitted name:

Uncharacterized protein

Gene

SORBI_3001G210000

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:SORBI_3001G210000Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeSorghinaeSorghum
Proteomesi
  • UP000000768 Componenti: Chromosome 1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb01g018570.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini112 – 242CDT1InterPro annotationAdd BLAST131

Phylogenomic databases

eggNOGiKOG0017 Eukaryota
KOG4762 Eukaryota
COG2801 LUCA
ENOG410XT37 LUCA
HOGENOMiHOG000214431
HOG000243510
InParanoidiC5WXD9
KOiK10727
OMAiEASHNGH
OrthoDBiEOG093606T0
EOG093610QY

Family and domain databases

InterProiView protein in InterPro
IPR032054 Cdt1_C
IPR014939 CDT1_Gemini-bd-like
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF08839 CDT1, 1 hit
PF16679 CDT1_C, 1 hit
SMARTiView protein in SMART
SM01075 CDT1, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit

Sequencei

Sequence statusi: Complete.

C5WXD9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEGDATQID LEKGLLQMSN DDDSSSPATM HKMKVDTEDA GIKIESPTPE
60 70 80 90 100
KLESRSKGVV VSSLARNLLA ERYKDRFANQ FVEDEGDTDD EDYNDSILPG
110 120 130 140 150
VSRSHMSRSI ELFEKHKDLL NLFNRMESSI RLLHLRKRMA TFSNIAAQVE
160 170 180 190 200
ILTKRKLSYS HLAQMKHLFP EAIQIKRILL HDEKSLCMYA DMEIILVMDV
210 220 230 240 250
VECTSPDQSP SMAICEAFYS KLLRFLDTHH KGTDIPEATL PEPFNSRSKG
260 270 280 290 300
QLFLEASHNG HAAEPHLQGT TEDGFSNASH FPQSFRKLMS QKVITDGAEK
310 320 330 340 350
TQLLPDPTKL SSVSAYDMEG TNRSPIKQDK HASFTVNSEI SATPSRHLIS
360 370 380 390 400
CCQEGTPKQE TSESPLLVQT PAMQTPKRPL PTPLEKLEAT CGHISEPRSA
410 420 430 440 450
SSARRSLNTS LKFEGGSPSY HDRMEHEAAS KKEIFSEDSS SFNKSLEEKD
460 470 480 490 500
PVFFTEDKIN LADQVGTQEK MASLRSTFDI VCGISHSTKN SLITKQELFH
510 520 530 540 550
NILANNLEIE QMGEVEEQLH ILEDLAPDWI SKKVINGGEI LYSIEPITDQ
560
NSVRERLVEA V
Length:561
Mass (Da):62,866
Last modified:November 2, 2016 - v2
Checksum:i1AE59F470A4CC010
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000760 Genomic DNA Translation: EER91439.2
CM000760 Genomic DNA Translation: EER91446.1
CM000760 Genomic DNA Translation: OQU91586.1
RefSeqiXP_002464448.1, XM_002464403.1

Genome annotation databases

EnsemblPlantsiEER91439; EER91439; SORBI_3001G210000
EER91446; EER91446; SORBI_3001G210000
OQU91586; OQU91586; SORBI_3001G210000
GeneIDi8067113
GrameneiEER91439; EER91439; SORBI_3001G210000
EER91446; EER91446; SORBI_3001G210000
OQU91586; OQU91586; SORBI_3001G210000
KEGGisbi:8067113

Similar proteinsi

Entry informationi

Entry nameiC5WXD9_SORBI
AccessioniPrimary (citable) accession number: C5WXD9
Secondary accession number(s): C5WXE9
Entry historyiIntegrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: November 2, 2016
Last modified: February 28, 2018
This is version 43 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health