C5WTU3 (C5WTU3_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb01g043810 EMBL EER95322.1

Gene names

Name:	Sb01g043810 EMBL EER95322.1
ORF Names:	SORBIDRAFT_01g043810 EMBL EER95322.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare)

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	467 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5WTU3 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: C53A03285FEC9A02	FASTA	467	53,501
	10 20 30 40 50 60 MGMRSRHPKA LGFRCYPASH RSLTLVLWSL AALVVVVNFH LLIIHKEEAE SMSTHEIRRS 70 80 90 100 110 120 IMRELEVVEE EKFRLSPPRS RRNPRAVRRK GEKKPPTIVD EFLDQSSAVH DMFFPELNTA 130 140 150 160 170 180 VDPINGGNDS MYFYYPGRIW LDTDGKPIQA HGGGVLYDKR TNTYFWYGEN KDGKTYKAHS 190 200 210 220 230 240 KGADRVDIIG VSCYSSKDLW TWKNEGLVLR GEEKNVTHDL HKSNVLERPK VIYNDRTGKY 250 260 270 280 290 300 VMWMHIDDAN YTKASVGVAV SDSPTGPFTY LYSKRPHDCE SRDMTIFKDD DGKAYLIYSS 310 320 330 340 350 360 EDNSELHIGP LTDDYLDVTD VMRRLLIAQH REAPALFRHE GTYYMVTSGC TGWAPNTALA 370 380 390 400 410 420 HAATSVMGPW ETLGNPCVGG NEVFRSTTFF SQSTFVLPVP GLPGSFIFMA DRWNPSDLID 430 440 450 460 SRYVWLPLTI GGIPDEAADY SFMFPLWSRV SIYWHKRWRL PEEWRDS

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed: 19189423] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000760 Genomic DNA. Translation: EER95322.1.
RefSeq	XP_002468324.1. XM_002468279.1.
UniGene	Sbi.18959.
3D structure databases
ProteinModelPortal	C5WTU3.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb01g043810.1; Sb01g043810.1; Sb01g043810.
GeneID	8054238.
KEGG	sbi:SORBI_01g043810.
Phylogenomic databases
GeneTree	EPGT00050000013758.
OMA	KGCILER.
PhylomeDB	C5WTU3.
ProtClustDB	CLSN2684377.
Family and domain databases
InterPro	IPR006710. Glyco_hydro_43. IPR023296. Glyco_hydro_43_beta-prop. [Graphical view]
Gene3D	G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
PANTHER	PTHR22925. Glyco_hydro_43. 1 hit.
Pfam	PF04616. Glyco_hydro_43. 1 hit. [Graphical view]
SUPFAM	SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C5WTU3_SORBI

Accession

Primary (citable) accession number: C5WTU3

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	December 14, 2011
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)