C5WSS1 (C5WSS1_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Cysteine synthase RuleBase RU003985
EC=2.5.1.47 RuleBase RU003985

Gene names

Name:	Sb01g042800 EMBL EER95270.1
ORF Names:	SORBIDRAFT_01g042800 EMBL EER95270.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare)

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	454 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	O(3)-acetyl-L-serine + H2S = L-cysteine + acetate. RuleBase RU003985
Sequence similarities	Belongs to the cysteine synthase/cystathionine beta-synthase family. RuleBase RU003985

Ontologies

Keywords
Biological process	Amino-acid biosynthesis Cysteine biosynthesis RuleBase RU003985
Molecular function	Transferase RuleBase RU003985
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	cysteine biosynthetic process from serine Inferred from electronic annotation. Source: InterPro
Molecular function	cysteine synthase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro transferase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5WSS1 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: AD70096A5B2BC39A	FASTA	454	48,716
	10 20 30 40 50 60 MAAATAAGAA AAAAAVSLIA CYLLLHKGRP NLPWVPTVGF SRASGRRARR RGLVEAIGNT 70 80 90 100 110 120 PLIRINSLSD ATGCEILGKA EFLNPGGSVK DRVAVKIIEE ALESGDLVYG GTVTEGSAGS 130 140 150 160 170 180 TAISLATVAP AYGCRCHVVI PDDAAIEKSQ IIEALGATVE RVRPVSITHR DHFVNIARRR 190 200 210 220 230 240 ALEANKLAAA QSESNEKQTN GLAHVGSEMM DDKLTAMQRE SNKMQNNDPA LFSTETLHSG 250 260 270 280 290 300 KCDVNSDSKG GFFADQFENM ANYRAHYEWT GPEIWKQTKG NLHAFVAAAG TGGTIAGVSR 310 320 330 340 350 360 YLKEKNRSIK CFLMDPPGSG LFNKVTRGVM YTKEEAEGKR LKNPFDTITE GIGINRVTKN 370 380 390 400 410 420 FMMAELDGAY RGSDREAVEM SRFLLKNDGL FVGSSSAMNC VGAVRVAQDL GPGHTIVTIL 430 440 450 CDSGMRHLSK FFNEQYLADH GLTPAATALE FLDK

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed: 19189423] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000760 Genomic DNA. Translation: EER95270.1.
RefSeq	XP_002468272.1. XM_002468227.1.
UniGene	Sbi.15896.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C5WSS1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb01g042800.1; Sb01g042800.1; Sb01g042800.
GeneID	8056886.
KEGG	sbi:SORBI_01g042800.
Phylogenomic databases
OMA	RVRPVSI.
PhylomeDB	C5WSS1.
ProtClustDB	CLSN2693670.
Family and domain databases
InterPro	IPR001216. Cys_synth_BS. IPR001926. PyrdxlP-dep_enz_bsu. [Graphical view]
KO	K01738.
Pfam	PF00291. PALP. 1 hit. [Graphical view]
SUPFAM	SSF53686. PyrdxlP-dep_enz_bsu. 1 hit.
PROSITE	PS00901. CYS_SYNTHASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5WSS1_SORBI

Accession

Primary (citable) accession number: C5WSS1

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	December 14, 2011
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)